RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
EPHB3-201ENST00000330394 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
EPHB3-201ENST00000330394 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
EPHB3-201ENST00000330394 INSP01308 110 aa10.73□□□□□ -0.69
EPHB3-201ENST00000330394 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
EPHB3-201ENST00000330394 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
EPHB3-201ENST00000330394 CEP192Q8TEP8 1941 aa10.73□□□□□ -0.69
EPHB3-201ENST00000330394 RHOHQ15669 191 aa10.72□□□□□ -0.69
EPHB3-201ENST00000330394 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
EPHB3-201ENST00000330394 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
EPHB3-201ENST00000330394 SOCS3O14543 225 aa10.72□□□□□ -0.69
EPHB3-201ENST00000330394 B4DSR2 109 aa10.72□□□□□ -0.69
EPHB3-201ENST00000330394 RHODO00212 210 aa10.71□□□□□ -0.69
EPHB3-201ENST00000330394 IGHG4P01861 327 aa10.71□□□□□ -0.69
EPHB3-201ENST00000330394 ZFP36P26651 326 aaKnown RBP10.71□□□□□ -0.69
EPHB3-201ENST00000330394 XGP55808 180 aa10.71□□□□□ -0.69
EPHB3-201ENST00000330394 HERV-K104P63124 156 aa10.71□□□□□ -0.69
EPHB3-201ENST00000330394 Q6ZQT7 251 aa10.71□□□□□ -0.69
EPHB3-201ENST00000330394 IGKV3D-7A0A0C4DH55 119 aa10.71□□□□□ -0.7
EPHB3-201ENST00000330394 ATP6V0E2Q8NHE4 81 aa10.71□□□□□ -0.7
EPHB3-201ENST00000330394 SPANXA1Q9NS26 97 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 U3KQK5 164 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 TRANK1O15050 2925 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 A0A0J9YY99 117 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 HHLA3Q9XRX5 114 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 LRP4O75096 1905 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 A0A096LNJ9 63 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 PF4P02776 101 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 GNLYP22749 145 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 SMAD5-AS1Q9Y6J3 95 aa10.7□□□□□ -0.7
EPHB3-201ENST00000330394 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 NDUFV3P56181 108 aaKnown RBP10.69□□□□□ -0.7
EPHB3-201ENST00000330394 HAMPP81172 84 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 TIMM17AQ99595 171 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 JMJD1CQ15652 2540 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 DEFB136Q30KP8 78 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 CCDC140Q96MF4 163 aa10.69□□□□□ -0.7
EPHB3-201ENST00000330394 CRYGBP07316 175 aa10.68□□□□□ -0.7
EPHB3-201ENST00000330394 MSMBP08118 114 aa10.68□□□□□ -0.7
EPHB3-201ENST00000330394 P0DMU3 169 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 FAM231AP0DMU4 169 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 FAM231CP0DMU5 169 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 TRACP01848 142 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 PIFOQ8TCI5 191 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 LGALS9O00182 355 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 ZFYVE26Q68DK2 2539 aa10.67□□□□□ -0.7
EPHB3-201ENST00000330394 CLPSL2Q6UWE3 100 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 CFAP126Q5VTH2 177 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 HERVK_113P63121 156 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 Q6ZS46 218 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 C20orf203Q8NBC4 194 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 DNAJC30Q96LL9 226 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 MTORP42345 2549 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 U3KQE9 123 aa10.66□□□□□ -0.7
EPHB3-201ENST00000330394 K7ENP7 123 aa10.65□□□□□ -0.7
EPHB3-201ENST00000330394 PRB1P04280 392 aa10.65□□□□□ -0.7
EPHB3-201ENST00000330394 PIP4P1Q86T03 277 aa10.65□□□□□ -0.7
EPHB3-201ENST00000330394 C5orf38Q86SI9 138 aa10.65□□□□□ -0.7
EPHB3-201ENST00000330394 NRACQ8N912 160 aa10.65□□□□□ -0.7
EPHB3-201ENST00000330394 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.71
EPHB3-201ENST00000330394 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.71
EPHB3-201ENST00000330394 SPATA25Q9BR10 227 aa10.65□□□□□ -0.71
EPHB3-201ENST00000330394 TMEM243Q9BU79 118 aa10.65□□□□□ -0.71
EPHB3-201ENST00000330394 A0A096LPF7 62 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 IGHV4-59P01825 116 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 NSUN5P1Q3KNT7 163 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 Q9HAA7 133 aa10.64□□□□□ -0.71
EPHB3-201ENST00000330394 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
EPHB3-201ENST00000330394 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
EPHB3-201ENST00000330394 A0A1B0GX51 115 aa10.63□□□□□ -0.71
EPHB3-201ENST00000330394 POLQO75417 2590 aa10.63□□□□□ -0.71
EPHB3-201ENST00000330394 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
EPHB3-201ENST00000330394 A8MZ25 164 aa10.63□□□□□ -0.71
EPHB3-201ENST00000330394 H3BT86 120 aa10.62□□□□□ -0.71
EPHB3-201ENST00000330394 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
EPHB3-201ENST00000330394 SRSF2Q01130 221 aaKnown RBP10.62□□□□□ -0.71
EPHB3-201ENST00000330394 UBL5Q9BZL1 73 aa10.62□□□□□ -0.71
EPHB3-201ENST00000330394 PRR9Q5T870 116 aa10.62□□□□□ -0.71
EPHB3-201ENST00000330394 PTPRBP23467 1997 aa10.62□□□□□ -0.71
EPHB3-201ENST00000330394 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
EPHB3-201ENST00000330394 TRIAP1O43715 76 aa10.61□□□□□ -0.71
EPHB3-201ENST00000330394 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
EPHB3-201ENST00000330394 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
EPHB3-201ENST00000330394 FREM2Q5SZK8 3169 aa10.61□□□□□ -0.71
EPHB3-201ENST00000330394 ZNF462Q96JM2 2506 aa10.61□□□□□ -0.71
EPHB3-201ENST00000330394 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 MRPS12O15235 138 aaKnown RBP10.6□□□□□ -0.71
EPHB3-201ENST00000330394 ZNF22P17026 224 aaPredicted RBP10.6□□□□□ -0.71
EPHB3-201ENST00000330394 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms