RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 HTN1P15515 57 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 LINC01619G3V211 115 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 BRD3OSQ6XYD6 125 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 RNASE13Q5GAN3 156 aaKnown RBP5.92□□□□□ -1.46
VMA21-201ENST00000330374 FAM159AQ6UWV7 190 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 MUSTN1Q8IVN3 82 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 CRYBG3Q68DQ2 2970 aa5.92□□□□□ -1.46
VMA21-201ENST00000330374 TRAV12-2A0A075B6T6 113 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 CRLF1O75462 422 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 MRPL23Q16540 153 aaKnown RBP5.91□□□□□ -1.46
VMA21-201ENST00000330374 CHD8Q9HCK8 2581 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 TRBV7-1A0A0A6YYK4 115 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 TRAV4A0A0B4J268 109 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 SNCGO76070 127 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 TRAV41A0A0B4J266 112 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 TEX49A0A1B0GTD5 131 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 MINOS1Q5TGZ0 78 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 SLC25A29Q8N8R3 303 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 MINOS1-NBL1R4GNA1 71 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 PRRC2AP48634 2157 aaKnown RBP5.91□□□□□ -1.46
VMA21-201ENST00000330374 IGHV3-73A0A0B4J1V6 119 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 IGIPA6NJ69 53 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 GAGE2BQ13066 116 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 GAGE2EQ4V326 116 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 GAGE2DQ9UEU5 116 aa5.91□□□□□ -1.46
VMA21-201ENST00000330374 EBI3Q14213 229 aa5.9□□□□□ -1.46
VMA21-201ENST00000330374 A0A0J9YXV3 536 aa5.9□□□□□ -1.46
VMA21-201ENST00000330374 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.46
VMA21-201ENST00000330374 C3orf56Q8N813 242 aa5.9□□□□□ -1.46
VMA21-201ENST00000330374 ITLN2Q8WWU7 325 aaPredicted RBP5.9□□□□□ -1.46
VMA21-201ENST00000330374 FAM110AQ9BQ89 295 aa5.9□□□□□ -1.46
VMA21-201ENST00000330374 Q6ZSV7 163 aa5.9□□□□□ -1.47
VMA21-201ENST00000330374 MRPL53Q96EL3 112 aaKnown RBP5.9□□□□□ -1.47
VMA21-201ENST00000330374 KLK9Q9UKQ9 250 aa5.9□□□□□ -1.47
VMA21-201ENST00000330374 CENPVL3A0A0U1RRI6 287 aa5.9□□□□□ -1.47
VMA21-201ENST00000330374 OVOL1O14753 267 aa5.9□□□□□ -1.47
VMA21-201ENST00000330374 TTC32Q5I0X7 151 aa5.9□□□□□ -1.47
VMA21-201ENST00000330374 RHPN1-AS1Q9BWJ2 59 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 OOSP1A8MZH6 123 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 CEMP1Q6PRD7 247 aaPredicted RBP5.89□□□□□ -1.47
VMA21-201ENST00000330374 MDFICQ9P1T7 246 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 V9GYY9 64 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 TMEM262E9PQX1 116 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 GAGE5Q13069 117 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 GAGE6Q13070 117 aa5.89□□□□□ -1.47
VMA21-201ENST00000330374 TRAV8-3A0A0A6YYJ7 113 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 PPP1R17O96001 155 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 UBE2E1P51965 193 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 LINC00315P59091 139 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 C5orf56Q8N8D9 126 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 BPESC1Q9GZL8 116 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 NPFFO15130 113 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 POLR2KP53803 58 aaKnown RBP5.88□□□□□ -1.47
VMA21-201ENST00000330374 ZNF876PQ49A33 203 aa5.88□□□□□ -1.47
VMA21-201ENST00000330374 TRAV8-4A0A0B4J246 113 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 A0A1W2PPR1 153 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 USP9YO00507 2555 aaPredicted RBP5.87□□□□□ -1.47
VMA21-201ENST00000330374 LINC01620Q4KN68 170 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 TMEM141Q96I45 108 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 AMELXQ99217 191 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 RETNQ9HD89 108 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 LENEPQ9Y5L5 61 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 KIF25-AS1Q9Y6Z4 181 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 SPTBN4Q9H254 2564 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 IGHV1-69DA0A0B4J2H0 117 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 DAND5Q8N907 189 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 TMEM263Q8WUH6 116 aaKnown RBP5.87□□□□□ -1.47
VMA21-201ENST00000330374 CLEC2BQ92478 149 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
VMA21-201ENST00000330374 P0DMU3 169 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 FAM231AP0DMU4 169 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 FAM231CP0DMU5 169 aa5.87□□□□□ -1.47
VMA21-201ENST00000330374 NDUFV3P56181 108 aaKnown RBP5.87□□□□□ -1.47
VMA21-201ENST00000330374 ATXN8Q156A1 80 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 C2orf82Q6UX34 121 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 CSMD2Q7Z408 3487 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 ZNF22P17026 224 aaPredicted RBP5.86□□□□□ -1.47
VMA21-201ENST00000330374 DUX3Q96PT4 197 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 KNCNA6PVL3 124 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 SOCS3O14543 225 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 BLCAPP62952 87 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 SPINK13Q1W4C9 94 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 PRM2P04554 102 aa5.86□□□□□ -1.47
VMA21-201ENST00000330374 TMEM223A0PJW6 202 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 LEPROTO15243 131 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 SBSPONQ8IVN8 264 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 SMIM20Q8N5G0 67 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 MOB4Q9Y3A3 225 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 ABCA2Q9BZC7 2435 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 CD28P10747 220 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 IFITM1P13164 125 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 C11orf71Q6IPW1 123 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms