RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 A8MWV9 139 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 F5H697 171 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 FAM74A4Q5TZK3 123 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 SBSPONQ8IVN8 264 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 MRAPQ8TCY5 172 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 PRO1933Q9H354 126 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 RETNQ9HD89 108 aa13.48□□□□□ -0.25
EXOSC3-201ENST00000327304 TRBV6-5A0A0K0K1A5 114 aa13.47□□□□□ -0.25
EXOSC3-201ENST00000327304 EDA2RQ9HAV5 297 aa13.47□□□□□ -0.25
EXOSC3-201ENST00000327304 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
EXOSC3-201ENST00000327304 ZNF56Q15929 161 aa13.46□□□□□ -0.25
EXOSC3-201ENST00000327304 RRN3P1Q2M238 152 aa13.46□□□□□ -0.25
EXOSC3-201ENST00000327304 ORMDL2Q53FV1 153 aa13.46□□□□□ -0.25
EXOSC3-201ENST00000327304 OR11H2Q8NH07 326 aa13.46□□□□□ -0.25
EXOSC3-201ENST00000327304 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
EXOSC3-201ENST00000327304 M0QY20 66 aa13.46□□□□□ -0.26
EXOSC3-201ENST00000327304 LINC01545Q5VT33 79 aa13.46□□□□□ -0.26
EXOSC3-201ENST00000327304 IL17DQ8TAD2 202 aa13.46□□□□□ -0.26
EXOSC3-201ENST00000327304 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.26
EXOSC3-201ENST00000327304 OVOL2Q9BRP0 275 aa13.46□□□□□ -0.26
EXOSC3-201ENST00000327304 TCAPO15273 167 aa13.45□□□□□ -0.26
EXOSC3-201ENST00000327304 TMEM263Q8WUH6 116 aaKnown RBP13.45□□□□□ -0.26
EXOSC3-201ENST00000327304 PAM16Q9Y3D7 125 aa13.45□□□□□ -0.26
EXOSC3-201ENST00000327304 LINC00587B1AMM8 73 aa13.44□□□□□ -0.26
EXOSC3-201ENST00000327304 POLR2KP53803 58 aaKnown RBP13.44□□□□□ -0.26
EXOSC3-201ENST00000327304 DEFA6Q01524 100 aa13.44□□□□□ -0.26
EXOSC3-201ENST00000327304 H7C1H1 209 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 UFSP1Q6NVU6 142 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 TP53TG1Q9Y2A0 90 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 TRAV9-2A0A087WT02 112 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 PLAC8L1A1L4L8 177 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 RHODO00212 210 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 VCYO14598 125 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 DDTP30046 118 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 C16orf74Q96GX8 76 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 TENM3Q9P273 2699 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 DNAH9Q9NYC9 4486 aa13.43□□□□□ -0.26
EXOSC3-201ENST00000327304 SMIM9A6NGZ8 99 aa13.42□□□□□ -0.26
EXOSC3-201ENST00000327304 NUDT3O95989 172 aa13.42□□□□□ -0.26
EXOSC3-201ENST00000327304 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
EXOSC3-201ENST00000327304 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
EXOSC3-201ENST00000327304 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 TRBV27A0A0K0K1C4 114 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 ATP5LO75964 103 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 CFAP126Q5VTH2 177 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 ATOH7Q8N100 152 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 HUWE1Q7Z6Z7 4374 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 RS1O15537 224 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 G0S2P27469 103 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 SPATA45Q537H7 98 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 Q8NAQ8 132 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 TM2D3Q9BRN9 247 aa13.41□□□□□ -0.26
EXOSC3-201ENST00000327304 SDHAF1A6NFY7 115 aa13.4□□□□□ -0.26
EXOSC3-201ENST00000327304 H0Y8G0 127 aa13.4□□□□□ -0.26
EXOSC3-201ENST00000327304 EMP1P54849 157 aa13.4□□□□□ -0.26
EXOSC3-201ENST00000327304 MRPL16Q9NX20 251 aaKnown RBP13.4□□□□□ -0.26
EXOSC3-201ENST00000327304 LINC01549A6NIU2 74 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 DEFB4AO15263 64 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 MIFP14174 115 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 C18orf15Q96N68 181 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 KIR2DL4Q99706 377 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 PRKDCP78527 4128 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 ZFP2Q6ZN57 461 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 TOMM6Q96B49 74 aa13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-201ENST00000327304 B9D2Q9BPU9 175 aa13.38□□□□□ -0.27
EXOSC3-201ENST00000327304 MIEN1Q9BRT3 115 aa13.36□□□□□ -0.27
EXOSC3-201ENST00000327304 TRGV1A0A0A0MS02 117 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 MAJINQ3KP22 176 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 C2orf66Q6UXQ4 117 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 Q6ZTI0 123 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 NEGR1Q7Z3B1 354 aa13.35□□□□□ -0.27
EXOSC3-201ENST00000327304 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 PRSS1P07477 247 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 PMCHL2Q9BQD1 86 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 I3L3M4 83 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 IGLC3P0DOY3 106 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 RHOHQ15669 191 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 SCGB3A1Q96QR1 104 aa13.34□□□□□ -0.27
EXOSC3-201ENST00000327304 OR4C5Q8NGB2 326 aa13.33□□□□□ -0.28
EXOSC3-201ENST00000327304 CYSLTR1Q9Y271 337 aa13.33□□□□□ -0.28
EXOSC3-201ENST00000327304 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 ODF1Q14990 250 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 FAM222AQ5U5X8 452 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 ERASQ7Z444 233 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 UQCR10Q9UDW1 63 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 TNFRSF18Q9Y5U5 241 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 hDV102S1A0JD36 115 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 CIDEAO60543 219 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 Q6ZN92 141 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 ZMAT4Q9H898 229 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
EXOSC3-201ENST00000327304 COL7A1Q02388 2944 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 TRAV12-1A0A0B4J245 112 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms