RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
SMCHD1-201ENST00000320876 RNF183Q96D59 192 aa13.08□□□□□ -0.32
SMCHD1-201ENST00000320876 ACACBO00763 2458 aa13.08□□□□□ -0.32
SMCHD1-201ENST00000320876 K7ENP7 123 aa13.08□□□□□ -0.32
SMCHD1-201ENST00000320876 MUC6Q6W4X9 2439 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 NDUFC2-KCTD14E9PQ53 114 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 FAM236DA0A1B0GTK5 79 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 FAM236CP0DP71 79 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 CCL18P55774 89 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 SP5Q6BEB4 398 aaPredicted RBP13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 PROK2Q9HC23 129 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 RSPO1Q2MKA7 263 aaPredicted RBP13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 HIVEP2P31629 2446 aa13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 PRR30Q53SZ7 412 aaPredicted RBP13.07□□□□□ -0.32
SMCHD1-201ENST00000320876 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 FAM240AA0A1B0GVK7 77 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 K7EIM0 57 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 C16orf54Q6UWD8 224 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 MPLKIPQ8TAP9 179 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 PRR15LQ9BU68 103 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 TEX49A0A1B0GTD5 131 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 DEFB136Q30KP8 78 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
SMCHD1-201ENST00000320876 V9GYY9 64 aa13.05□□□□□ -0.32
SMCHD1-201ENST00000320876 K7ERS5 55 aa13.05□□□□□ -0.32
SMCHD1-201ENST00000320876 C3orf22Q8N5N4 141 aa13.05□□□□□ -0.32
SMCHD1-201ENST00000320876 ADAMTS20P59510 1910 aa13.05□□□□□ -0.32
SMCHD1-201ENST00000320876 COL5A1P20908 1838 aaPredicted RBP13.04□□□□□ -0.32
SMCHD1-201ENST00000320876 IGKV2D-26A0A0A0MRZ7 120 aa13.04□□□□□ -0.32
SMCHD1-201ENST00000320876 FAM167A-AS1Q96KT0 104 aa13.04□□□□□ -0.32
SMCHD1-201ENST00000320876 MIR7-3HGQ8N6C7 128 aa13.04□□□□□ -0.32
SMCHD1-201ENST00000320876 BPY2O14599 106 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 COX7BP24311 80 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 SLURP1P55000 103 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 TRBV6-1A0A0K0K1D8 114 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 C2CD3Q4AC94 2353 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 WISP1O95388 367 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 MDFICQ9P1T7 246 aa13.03□□□□□ -0.32
SMCHD1-201ENST00000320876 NDUFC1O43677 76 aa13.02□□□□□ -0.32
SMCHD1-201ENST00000320876 TM2D2Q9BX73 214 aa13.02□□□□□ -0.32
SMCHD1-201ENST00000320876 CTSGP08311 255 aa13.02□□□□□ -0.32
SMCHD1-201ENST00000320876 IGHV7-81A0A0B4J1V7 117 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 IGKV1-17P01599 117 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 IGHV3-30P01768 117 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 IGHV3-30-3P0DP02 117 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 USP17L23D6RBM5 183 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
SMCHD1-201ENST00000320876 SDIM1Q6ZPB5 146 aa13.01□□□□□ -0.33
SMCHD1-201ENST00000320876 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
SMCHD1-201ENST00000320876 B9D2Q9BPU9 175 aa13.01□□□□□ -0.33
SMCHD1-201ENST00000320876 SPATA12Q7Z6I5 190 aa13.01□□□□□ -0.33
SMCHD1-201ENST00000320876 CASC2Q6XLA1 102 aa13□□□□□ -0.33
SMCHD1-201ENST00000320876 IGHV4-59P01825 116 aa13□□□□□ -0.33
SMCHD1-201ENST00000320876 IGHV4OR15-8A0A075B7B6 117 aa13□□□□□ -0.33
SMCHD1-201ENST00000320876 A0A087WW49 117 aa13□□□□□ -0.33
SMCHD1-201ENST00000320876 SPRY2O43597 315 aa13□□□□□ -0.33
SMCHD1-201ENST00000320876 IGLV2-23P01705 113 aa13□□□□□ -0.33
SMCHD1-201ENST00000320876 CENPVL3A0A0U1RRI6 287 aa12.99□□□□□ -0.33
SMCHD1-201ENST00000320876 MT-ATP8P03928 68 aa12.99□□□□□ -0.33
SMCHD1-201ENST00000320876 C11orf53Q8IXP5 236 aa12.99□□□□□ -0.33
SMCHD1-201ENST00000320876 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
SMCHD1-201ENST00000320876 TMEM263Q8WUH6 116 aaKnown RBP12.99□□□□□ -0.33
SMCHD1-201ENST00000320876 CACNA1AO00555 2505 aa12.99□□□□□ -0.33
SMCHD1-201ENST00000320876 PRSS33Q8NF86 280 aa12.98□□□□□ -0.33
SMCHD1-201ENST00000320876 C5orf56Q8N8D9 126 aa12.98□□□□□ -0.33
SMCHD1-201ENST00000320876 ABCA2Q9BZC7 2435 aa12.98□□□□□ -0.33
SMCHD1-201ENST00000320876 KRTAP27-1Q3LI81 207 aa12.98□□□□□ -0.33
SMCHD1-201ENST00000320876 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
SMCHD1-201ENST00000320876 PTH2Q96A98 100 aa12.97□□□□□ -0.33
SMCHD1-201ENST00000320876 RITA1Q96K30 269 aa12.97□□□□□ -0.33
SMCHD1-201ENST00000320876 IGLC6P0CF74 106 aa12.97□□□□□ -0.33
SMCHD1-201ENST00000320876 DEFB112Q30KQ8 113 aa12.97□□□□□ -0.33
SMCHD1-201ENST00000320876 FAM215AQ9Y5M1 114 aa12.97□□□□□ -0.33
SMCHD1-201ENST00000320876 MYO9AB2RTY4 2548 aa12.96□□□□□ -0.33
SMCHD1-201ENST00000320876 AJUBAQ96IF1 538 aa12.96□□□□□ -0.33
SMCHD1-201ENST00000320876 A0A0U1RQV1 116 aa12.96□□□□□ -0.33
SMCHD1-201ENST00000320876 TTTY13Q9BZ97 58 aa12.96□□□□□ -0.33
SMCHD1-201ENST00000320876 CTSZQ9UBR2 303 aa12.96□□□□□ -0.34
SMCHD1-201ENST00000320876 C20orf197Q8N268 126 aa12.96□□□□□ -0.34
SMCHD1-201ENST00000320876 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 C2orf70A6NJV1 201 aa12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 F8W735 103 aaPredicted RBP12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 NDUFA7O95182 113 aa12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 C4orf3Q8WVX3 66 aa12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 ZNF524Q96C55 264 aa12.95□□□□□ -0.34
SMCHD1-201ENST00000320876 C10orf105Q8TEF2 133 aa12.94□□□□□ -0.34
SMCHD1-201ENST00000320876 K7EMT4 169 aa12.94□□□□□ -0.34
SMCHD1-201ENST00000320876 PIK3CD-AS1Q5SR53 167 aa12.93□□□□□ -0.34
SMCHD1-201ENST00000320876 C19orf71A6NCJ1 209 aa12.93□□□□□ -0.34
SMCHD1-201ENST00000320876 GPHB5Q86YW7 130 aa12.93□□□□□ -0.34
SMCHD1-201ENST00000320876 CCDC168Q8NDH2 2452 aa12.93□□□□□ -0.34
SMCHD1-201ENST00000320876 KIR2DL5BQ8NHK3 375 aa12.93□□□□□ -0.34
SMCHD1-201ENST00000320876 LY6G6EA0A0G2JKS1 128 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 TRBV10-1A0A0K0K1A3 114 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms