RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SYNJ2BPP57105 145 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 Q6ZUT4 128 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 C15orf53Q8NAA6 179 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 NPBQ8NG41 125 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 MOB4Q9Y3A3 225 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 ODF3BA8MYP8 253 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 PPP1R17O96001 155 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 MINOS1Q5TGZ0 78 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 MINOS1-NBL1R4GNA1 71 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 IGHV1-69DA0A0B4J2H0 117 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 IGHV3-16A0A0C4DH30 117 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 IGHV1-69P01742 117 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 XGP55808 180 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 TAL2Q16559 108 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
RETREG3-201ENST00000309428 NIPBLQ6KC79 2804 aaeCLIP9.63□□□□□ -0.87
RETREG3-201ENST00000309428 AVPP01185 164 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 C9orf139Q6ZV77 190 aa9.63□□□□□ -0.87
RETREG3-201ENST00000309428 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
RETREG3-201ENST00000309428 OR13C6PQ8NH95 151 aa9.62□□□□□ -0.87
RETREG3-201ENST00000309428 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE5Q13069 117 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE6Q13070 117 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 C5orf56Q8N8D9 126 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 TIMM21Q9BVV7 248 aa9.61□□□□□ -0.87
RETREG3-201ENST00000309428 OVOL1O14753 267 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 CFC1P0CG37 223 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 PRR9Q5T870 116 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
RETREG3-201ENST00000309428 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 CIRBPQ14011 172 aaKnown RBP9.6□□□□□ -0.87
RETREG3-201ENST00000309428 DEFB112Q30KQ8 113 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 FBXL19-AS1Q494R0 122 aa9.6□□□□□ -0.87
RETREG3-201ENST00000309428 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
RETREG3-201ENST00000309428 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE7O76087 117 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GATA3P23771 443 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GAGE4Q13068 117 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 H3BMM0 161 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 MSMBP08118 114 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.87
RETREG3-201ENST00000309428 IFITM1P13164 125 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 RASL10AQ92737 203 aa9.59□□□□□ -0.87
RETREG3-201ENST00000309428 TEX49A0A1B0GTD5 131 aa9.58□□□□□ -0.88
RETREG3-201ENST00000309428 AJUBAQ96IF1 538 aa9.58□□□□□ -0.88
RETREG3-201ENST00000309428 U3KQK5 164 aa9.58□□□□□ -0.88
RETREG3-201ENST00000309428 SCGB1A1P11684 91 aa9.58□□□□□ -0.88
RETREG3-201ENST00000309428 CLEC2BQ92478 149 aa9.58□□□□□ -0.88
RETREG3-201ENST00000309428 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
RETREG3-201ENST00000309428 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
RETREG3-201ENST00000309428 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
RETREG3-201ENST00000309428 NDUFA12Q9UI09 145 aa9.57□□□□□ -0.88
RETREG3-201ENST00000309428 IGHG4P01861 327 aa9.57□□□□□ -0.88
RETREG3-201ENST00000309428 SUMO4Q6EEV6 95 aa9.57□□□□□ -0.88
RETREG3-201ENST00000309428 TRBV7-1A0A0A6YYK4 115 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
RETREG3-201ENST00000309428 DNAL4O96015 105 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 COX6B1P14854 86 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 LINC01587Q99440 93 aa9.56□□□□□ -0.88
RETREG3-201ENST00000309428 CLPSL1A2RUU4 121 aa9.55□□□□□ -0.88
RETREG3-201ENST00000309428 NRACQ8N912 160 aa9.55□□□□□ -0.88
RETREG3-201ENST00000309428 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
RETREG3-201ENST00000309428 ATRQ13535 2644 aa9.55□□□□□ -0.88
RETREG3-201ENST00000309428 A8MZ25 164 aa9.55□□□□□ -0.88
RETREG3-201ENST00000309428 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 CRIP2P52943 208 aaPredicted RBP9.54□□□□□ -0.88
RETREG3-201ENST00000309428 KRTAP10-9P60411 292 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 MORN3Q6PF18 240 aaPredicted RBP9.54□□□□□ -0.88
RETREG3-201ENST00000309428 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 EDA2RQ9HAV5 297 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 TRBV7-3A0A075B6L6 115 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
RETREG3-201ENST00000309428 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
RETREG3-201ENST00000309428 OOSP1A8MZH6 123 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 LINC01620Q4KN68 170 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
RETREG3-201ENST00000309428 P0DMU3 169 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 FAM231AP0DMU4 169 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 FAM231CP0DMU5 169 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms