RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 SLC25A20O43772 301 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 K7ERJ3 54 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 SCGB1A1P11684 91 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 ODF1Q14990 250 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 Q6ZSV7 163 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 Q6ZVH6 145 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 DEFB125Q8N687 156 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 RAI1Q7Z5J4 1906 aaPredicted RBP8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
PCDHGC3-201ENST00000308177 PCSK5Q92824 1860 aa8.6□□□□□ -1.03
PCDHGC3-201ENST00000308177 PFN2P35080 140 aa8.6□□□□□ -1.03
PCDHGC3-201ENST00000308177 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
PCDHGC3-201ENST00000308177 TIMM17AQ99595 171 aa8.6□□□□□ -1.03
PCDHGC3-201ENST00000308177 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
PCDHGC3-201ENST00000308177 H3BMM0 161 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 K7EQD1 137 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 C9JAW5 83 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 DEFB114Q30KQ6 69 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 DSCAML1Q8TD84 2053 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 A0A0J9YY99 117 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 C12orf74Q32Q52 190 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 ZNF702PQ9H963 129 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 TSPAN13O95857 204 aa8.59□□□□□ -1.03
PCDHGC3-201ENST00000308177 TRBV20-1A0A075B6N2 111 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 K7EP34 96 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 GHRHP01286 108 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 PIFOQ8TCI5 191 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 DAZ4Q86SG3 579 aaKnown RBP8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 DAZ3Q9NR90 486 aaKnown RBP8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 MRPS12O15235 138 aaKnown RBP8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 BOD1L2Q8IYS8 172 aa8.58□□□□□ -1.04
PCDHGC3-201ENST00000308177 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
PCDHGC3-201ENST00000308177 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
PCDHGC3-201ENST00000308177 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 FGF6P10767 208 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 KRTAP10-9P60411 292 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 GYPEP15421 78 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 MRGPRG-AS1Q2M3A8 158 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 UBE2DNLQ8IWF7 75 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 ETDBQ3ZM63 59 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 OCIAD2Q56VL3 154 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
PCDHGC3-201ENST00000308177 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 Q9H8V8 135 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 K7EP13 123 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 E9PLD3 99 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 CRLF1O75462 422 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 AMTNQ6UX39 209 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 TET2Q6N021 2002 aaPredicted RBP8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 U3KQK5 164 aa8.55□□□□□ -1.04
PCDHGC3-201ENST00000308177 H3BMG7 143 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 XCL1P47992 114 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 INSL3P51460 131 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 PRR9Q5T870 116 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 NXPH4O95158 308 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 CRIP2P52943 208 aaPredicted RBP8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 OVOL2Q9BRP0 275 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 PTPRBP23467 1997 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 ATP5G1P05496 136 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 SPART-AS1P0CW21 52 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 FXYD2P54710 66 aa8.54□□□□□ -1.04
PCDHGC3-201ENST00000308177 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 F8W1H4 67 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 DEFB135Q30KP9 77 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 Q6ZQT7 251 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 C5orf38Q86SI9 138 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 P0DMU3 169 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 FAM231AP0DMU4 169 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 FAM231CP0DMU5 169 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 HIST2H2BDQ6DRA6 164 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 SLC25A29Q8N8R3 303 aa8.53□□□□□ -1.04
PCDHGC3-201ENST00000308177 HHLA3Q9XRX5 114 aa8.52□□□□□ -1.04
PCDHGC3-201ENST00000308177 DCANP1Q8TF63 244 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 C18orf65Q6ZTR6 163 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 NDUFA11Q86Y39 141 aa8.52□□□□□ -1.05
PCDHGC3-201ENST00000308177 KLLNB2CW77 178 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms