RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 ORMDL2Q53FV1 153 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 SCGB1C2P0DMR2 95 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
LONRF3-201ENST00000304778 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 RASL10AQ92737 203 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 S100A4P26447 101 aaKnown RBP12.11□□□□□ -0.47
LONRF3-201ENST00000304778 ASIPP42127 132 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 KLHL30-AS1Q8NEE0 82 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 IGHV4-31P0DP07 118 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 IFITM1P13164 125 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 CFHR3Q02985 330 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 DEFB113Q30KQ7 82 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 TOMM6Q96B49 74 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 RPL39LQ96EH5 51 aaKnown RBP12.1□□□□□ -0.47
LONRF3-201ENST00000304778 FAM19A4Q96LR4 140 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 PHLDA3Q9Y5J5 127 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 SCGB3A1Q96QR1 104 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 BEX4Q9NWD9 120 aaPredicted RBP12.09□□□□□ -0.47
LONRF3-201ENST00000304778 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 SLC25A20O43772 301 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 C14orf178Q8N769 122 aaPredicted RBP12.09□□□□□ -0.47
LONRF3-201ENST00000304778 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 TLN2Q9Y4G6 2542 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 C9JAW5 83 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 RAX2Q96IS3 184 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 HECTD1Q9ULT8 2610 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 CFC1P0CG37 223 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 RNASE4P34096 147 aaKnown RBP12.07□□□□□ -0.48
LONRF3-201ENST00000304778 RPL11P62913 178 aaKnown RBP12.07□□□□□ -0.48
LONRF3-201ENST00000304778 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 F6UB75 175 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 MGPP08493 103 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 J3QKU1 62 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 FSHBP01225 129 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
LONRF3-201ENST00000304778 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
LONRF3-201ENST00000304778 LRRC75A-AS1Q8N1F1 130 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 Q96MF0 132 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 CR1P17927 2039 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 GNRH2O43555 120 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 PSMB8P28062 276 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
LONRF3-201ENST00000304778 BAALCQ8WXS3 180 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 RHPN1-AS1Q9BWJ2 59 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 NXPH4O95158 308 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 PPP1R17O96001 155 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 Q6YL49 198 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
LONRF3-201ENST00000304778 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
LONRF3-201ENST00000304778 A0A0J9YY99 117 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 MEIG1Q5JSS6 88 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 Q8N1Y9 231 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 POM121L12Q8N7R1 296 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
LONRF3-201ENST00000304778 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 APCP25054 2843 aa12.02□□□□□ -0.48
LONRF3-201ENST00000304778 EDN2P20800 178 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 KRTAP1-3Q8IUG1 177 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 C3orf56Q8N813 242 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 MUC4Q99102 2169 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 SORL1Q92673 2214 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 KLLNB2CW77 178 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 H7C2G1 150 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 Q6Q795 121 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 LINC00315P59091 139 aa12□□□□□ -0.49
LONRF3-201ENST00000304778 SONP18583 2426 aaKnown RBP11.99□□□□□ -0.49
LONRF3-201ENST00000304778 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 IGHV4OR15-8A0A075B7B6 117 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 A0A087WW49 117 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 DUSP14O95147 198 aaKnown RBP11.99□□□□□ -0.49
LONRF3-201ENST00000304778 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 ITPR2Q14571 2701 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 K7EMT4 169 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms