RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 A8MWV9 139 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 F8VRH5 84 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 H7C1H1 209 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 HOXD3P31249 432 aaPredicted RBP9.68□□□□□ -0.86
ZIC3-201ENST00000287538 KLHL30-AS1Q8NEE0 82 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 ZNF815PA8K554 130 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 TRAV12-3A0A0B4J271 114 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 TRBV7-9A0A0J9YWB2 115 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 TCL1BO95988 128 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 PRR9Q5T870 116 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 ZNF575Q86XF7 245 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 ANKRD29Q8N6D5 301 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 PSMB8P28062 276 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 SMIM20Q8N5G0 67 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 VCX2Q9H322 139 aa9.67□□□□□ -0.86
ZIC3-201ENST00000287538 LINC01619G3V211 115 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 ZNF702PQ9H963 129 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 GNRH2O43555 120 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 MGPP08493 103 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
ZIC3-201ENST00000287538 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 C19orf54Q5BKX5 351 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 LYRM7Q5U5X0 104 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 C9orf139Q6ZV77 190 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 F8P00451 2351 aa9.66□□□□□ -0.86
ZIC3-201ENST00000287538 IGKV3D-20A0A0C4DH25 116 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 UBE2D3P61077 147 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 UBE2D2P62837 147 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 GAGE2BQ13066 116 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 GPHB5Q86YW7 130 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 CNFNQ9BYD5 112 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
ZIC3-201ENST00000287538 CCDC179H3BU77 68 aa9.65□□□□□ -0.87
ZIC3-201ENST00000287538 UBE2D1P51668 147 aa9.65□□□□□ -0.87
ZIC3-201ENST00000287538 SPINK13Q1W4C9 94 aa9.64□□□□□ -0.87
ZIC3-201ENST00000287538 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
ZIC3-201ENST00000287538 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
ZIC3-201ENST00000287538 ID1P41134 155 aa9.64□□□□□ -0.87
ZIC3-201ENST00000287538 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
ZIC3-201ENST00000287538 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
ZIC3-201ENST00000287538 GAGE12JA6NER3 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 SNCGO76070 127 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 GAGE7O76087 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 GAGE12FP0CL80 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 GAGE12GP0CL81 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 GAGE12IP0CL82 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 GAGE4Q13068 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 NRACQ8N912 160 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 CITED1Q99966 193 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 KLK9Q9UKQ9 250 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 F5H697 171 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 NDUFV3P56181 108 aaKnown RBP9.63□□□□□ -0.87
ZIC3-201ENST00000287538 TTC32Q5I0X7 151 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 U3KQE9 123 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 IGHV3OR16-12A0A075B7B8 117 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 PRM2P04554 102 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 KRTAP1-3Q8IUG1 177 aa9.63□□□□□ -0.87
ZIC3-201ENST00000287538 H3BUA1 57 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 NDUFA11Q86Y39 141 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
ZIC3-201ENST00000287538 TRAV12-1A0A0B4J245 112 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 TRAV4A0A0B4J268 109 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 RHODO00212 210 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 CD7P09564 240 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 RPL32P62910 135 aaKnown RBP9.62□□□□□ -0.87
ZIC3-201ENST00000287538 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 SNRPD3P62318 126 aaKnown RBP9.62□□□□□ -0.87
ZIC3-201ENST00000287538 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
ZIC3-201ENST00000287538 KMT2BQ9UMN6 2715 aaPredicted RBP9.62□□□□□ -0.87
ZIC3-201ENST00000287538 PDZD2O15018 2839 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 DEFB131AP59861 70 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 FAM110AQ9BQ89 295 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 OTOGQ6ZRI0 2925 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 C9JAW5 83 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 OVOL1O14753 267 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 CRLF1O75462 422 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 CRIP2P52943 208 aaPredicted RBP9.61□□□□□ -0.87
ZIC3-201ENST00000287538 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 Q6ZSV7 163 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 LRRC75A-AS1Q8N1F1 130 aa9.61□□□□□ -0.87
ZIC3-201ENST00000287538 SLC25A20O43772 301 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 CFHR3Q02985 330 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 LINC00477Q96M19 166 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 ELANEP08246 267 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 APRG1Q8IVJ8 170 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
ZIC3-201ENST00000287538 IFITM1P13164 125 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 SBSPONQ8IVN8 264 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms