RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CRYGAP11844 174 aa11.8□□□□□ -0.52
CTDSP1-201ENST00000273062 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
CTDSP1-201ENST00000273062 IGIPA6NJ69 53 aa11.79□□□□□ -0.52
CTDSP1-201ENST00000273062 PKD1L2Q7Z442 2459 aa11.79□□□□□ -0.52
CTDSP1-201ENST00000273062 MGPP08493 103 aa11.79□□□□□ -0.52
CTDSP1-201ENST00000273062 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 NPC2P61916 151 aa11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 C11orf71Q6IPW1 123 aa11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 ZFHX3Q15911 3703 aa11.78□□□□□ -0.52
CTDSP1-201ENST00000273062 FAM19A4Q96LR4 140 aa11.77□□□□□ -0.52
CTDSP1-201ENST00000273062 DUX5Q96PT3 197 aa11.77□□□□□ -0.52
CTDSP1-201ENST00000273062 PIEZO1Q92508 2521 aa11.77□□□□□ -0.53
CTDSP1-201ENST00000273062 RS1O15537 224 aa11.77□□□□□ -0.53
CTDSP1-201ENST00000273062 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.53
CTDSP1-201ENST00000273062 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
CTDSP1-201ENST00000273062 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
CTDSP1-201ENST00000273062 IGHV3-66A0A0C4DH42 116 aa11.76□□□□□ -0.53
CTDSP1-201ENST00000273062 LST1O00453 97 aa11.76□□□□□ -0.53
CTDSP1-201ENST00000273062 PRR9Q5T870 116 aa11.76□□□□□ -0.53
CTDSP1-201ENST00000273062 RHOHQ15669 191 aa11.76□□□□□ -0.53
CTDSP1-201ENST00000273062 IGF1P05019 195 aa11.75□□□□□ -0.53
CTDSP1-201ENST00000273062 PRSS2P07478 247 aa11.75□□□□□ -0.53
CTDSP1-201ENST00000273062 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
CTDSP1-201ENST00000273062 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 LY6LH3BQJ8 138 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 I3L3M4 83 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 ZNF876PQ49A33 203 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 GPHB5Q86YW7 130 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 CFAP46Q8IYW2 2715 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 TRACP01848 142 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 PAPPA-AS1Q5QFB9 102 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 ADAMTSL4-AS1Q5T5F5 129 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
CTDSP1-201ENST00000273062 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
CTDSP1-201ENST00000273062 PRORYQ9H606 182 aa11.73□□□□□ -0.53
CTDSP1-201ENST00000273062 TRBV7-1A0A0A6YYK4 115 aa11.73□□□□□ -0.53
CTDSP1-201ENST00000273062 A0A0J9YXY3 114 aa11.73□□□□□ -0.53
CTDSP1-201ENST00000273062 LITAFQ99732 161 aa11.73□□□□□ -0.53
CTDSP1-201ENST00000273062 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
CTDSP1-201ENST00000273062 GNLYP22749 145 aa11.72□□□□□ -0.53
CTDSP1-201ENST00000273062 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
CTDSP1-201ENST00000273062 DCANP1Q8TF63 244 aa11.72□□□□□ -0.53
CTDSP1-201ENST00000273062 LEPROTO15243 131 aa11.71□□□□□ -0.53
CTDSP1-201ENST00000273062 FANCD2OSQ96PS1 177 aa11.71□□□□□ -0.53
CTDSP1-201ENST00000273062 DPH3P1Q9H4G8 78 aa11.71□□□□□ -0.54
CTDSP1-201ENST00000273062 ATP5G1P05496 136 aa11.7□□□□□ -0.54
CTDSP1-201ENST00000273062 HIST1H4AP62805 103 aaKnown RBP11.7□□□□□ -0.54
CTDSP1-201ENST00000273062 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
CTDSP1-201ENST00000273062 COX6CP09669 75 aa11.7□□□□□ -0.54
CTDSP1-201ENST00000273062 CITED2Q99967 270 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-201ENST00000273062 PYGO1Q9Y3Y4 419 aa11.7□□□□□ -0.54
CTDSP1-201ENST00000273062 CACNA1AO00555 2505 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 JPT2Q9H910 190 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 ACYP1P07311 99 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 SDIM1Q6ZPB5 146 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 DPM3Q9P2X0 92 aa11.69□□□□□ -0.54
CTDSP1-201ENST00000273062 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
CTDSP1-201ENST00000273062 TMEM258P61165 79 aa11.68□□□□□ -0.54
CTDSP1-201ENST00000273062 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
CTDSP1-201ENST00000273062 C10orf105Q8TEF2 133 aa11.68□□□□□ -0.54
CTDSP1-201ENST00000273062 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
CTDSP1-201ENST00000273062 UPK3BQ9BT76 320 aa11.68□□□□□ -0.54
CTDSP1-201ENST00000273062 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
CTDSP1-201ENST00000273062 C9orf47Q6ZRZ4 202 aa11.67□□□□□ -0.54
CTDSP1-201ENST00000273062 CELSR1Q9NYQ6 3014 aa11.67□□□□□ -0.54
CTDSP1-201ENST00000273062 ODF3BA8MYP8 253 aa11.67□□□□□ -0.54
CTDSP1-201ENST00000273062 CTSGP08311 255 aa11.67□□□□□ -0.54
CTDSP1-201ENST00000273062 PRRC2AP48634 2157 aaKnown RBP11.67□□□□□ -0.54
CTDSP1-201ENST00000273062 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 J3QLI3 93 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 MRAPQ8TCY5 172 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 A8MZ25 164 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 ATOX1O00244 68 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 NBR2O15453 112 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 DAND5Q8N907 189 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 TIMM17AQ99595 171 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 PHLDA3Q9Y5J5 127 aa11.66□□□□□ -0.54
CTDSP1-201ENST00000273062 IGSF10Q6WRI0 2623 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 FLNCQ14315 2725 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 IGLV11-55A0A075B6I3 123 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 A0A087WVE0 104 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 DEFB1P60022 68 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 CSMD2Q7Z408 3487 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 CXCL5P42830 114 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 TMEM141Q96I45 108 aa11.65□□□□□ -0.54
CTDSP1-201ENST00000273062 PEMTQ9UBM1 199 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms