RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 APOMO95445 188 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 TRBV25-1A0A075B6N4 114 aa10.06□□□□□ -0.8
VMP1-201ENST00000262291 FHL3Q13643 280 aa10.06□□□□□ -0.8
VMP1-201ENST00000262291 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
VMP1-201ENST00000262291 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
VMP1-201ENST00000262291 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
VMP1-201ENST00000262291 CDIP1Q9H305 208 aa10.06□□□□□ -0.8
VMP1-201ENST00000262291 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
VMP1-201ENST00000262291 A0A087WWL8 130 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 HBDP02042 147 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 XGP55808 180 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 TEX29Q8N6K0 151 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 ZNF418Q8TF45 676 aaPredicted RBP10.05□□□□□ -0.8
VMP1-201ENST00000262291 TSPAN13O95857 204 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 LY6G6DO95868 133 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 CEND1Q8N111 149 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 NRACQ8N912 160 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 PEMTQ9UBM1 199 aa10.05□□□□□ -0.8
VMP1-201ENST00000262291 CCL24O00175 119 aa10.04□□□□□ -0.8
VMP1-201ENST00000262291 RBMY1A1P0DJD3 496 aaKnown RBP10.04□□□□□ -0.8
VMP1-201ENST00000262291 RBMY1CP0DJD4 496 aa10.04□□□□□ -0.8
VMP1-201ENST00000262291 LEPP41159 167 aa10.04□□□□□ -0.8
VMP1-201ENST00000262291 RBMY1FQ15415 496 aaKnown RBP10.04□□□□□ -0.8
VMP1-201ENST00000262291 PRO0461Q9UI25 63 aa10.04□□□□□ -0.8
VMP1-201ENST00000262291 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
VMP1-201ENST00000262291 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
VMP1-201ENST00000262291 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
VMP1-201ENST00000262291 Q8N1Y9 231 aa10.04□□□□□ -0.8
VMP1-201ENST00000262291 IGHV4-4A0A075B6R2 117 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 B5MCH6 92 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 DEFB114Q30KQ6 69 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 PTH2Q96A98 100 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
VMP1-201ENST00000262291 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 PRSS1P07477 247 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.81
VMP1-201ENST00000262291 FOXI1Q12951 378 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
VMP1-201ENST00000262291 Q6ZUT4 128 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 RASL10AQ92737 203 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 ANAPC13Q9BS18 74 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 MAP6D1Q9H9H5 199 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 DPH3P1Q9H4G8 78 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
VMP1-201ENST00000262291 IGHV3-16A0A0C4DH30 117 aa10□□□□□ -0.81
VMP1-201ENST00000262291 DUSP14O95147 198 aaKnown RBP10□□□□□ -0.81
VMP1-201ENST00000262291 TMEM160Q9NX00 188 aa10□□□□□ -0.81
VMP1-201ENST00000262291 ERG28Q9UKR5 140 aa10□□□□□ -0.81
VMP1-201ENST00000262291 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
VMP1-201ENST00000262291 INAFM1C9JVW0 142 aa10□□□□□ -0.81
VMP1-201ENST00000262291 F5H697 171 aa10□□□□□ -0.81
VMP1-201ENST00000262291 H3BMM0 161 aa10□□□□□ -0.81
VMP1-201ENST00000262291 HIST1H4GQ99525 98 aa10□□□□□ -0.81
VMP1-201ENST00000262291 TM2D2Q9BX73 214 aa10□□□□□ -0.81
VMP1-201ENST00000262291 HIVEP1P15822 2718 aa10□□□□□ -0.81
VMP1-201ENST00000262291 IGLV2-18A0A075B6J9 118 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 ODF1Q14990 250 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 PRSS29PA6NIE9 313 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 HILS1P60008 231 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 HERV-K104P63124 156 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 Q8N8P6 123 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 C2CD3Q4AC94 2353 aa9.99□□□□□ -0.81
VMP1-201ENST00000262291 A6NJY4 79 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
VMP1-201ENST00000262291 RRN3P1Q2M238 152 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 NXT2Q9NPJ8 142 aaKnown RBP9.98□□□□□ -0.81
VMP1-201ENST00000262291 HLA-DRB4P13762 266 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 HLA-DRB4X5D2U9 266 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 IGHV3-73A0A0B4J1V6 119 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 OR11H12B2RN74 326 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 IGKCP01834 107 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 OR11H2Q8NH07 326 aa9.98□□□□□ -0.81
VMP1-201ENST00000262291 ZNF256Q9Y2P7 627 aaPredicted RBP9.98□□□□□ -0.81
VMP1-201ENST00000262291 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
VMP1-201ENST00000262291 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
VMP1-201ENST00000262291 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
VMP1-201ENST00000262291 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
VMP1-201ENST00000262291 LINC00315P59091 139 aa9.97□□□□□ -0.81
VMP1-201ENST00000262291 ODF3L2Q3SX64 289 aa9.97□□□□□ -0.81
VMP1-201ENST00000262291 KIF25-AS1Q9Y6Z4 181 aa9.97□□□□□ -0.81
VMP1-201ENST00000262291 KRTAP10-3P60369 221 aa9.96□□□□□ -0.81
VMP1-201ENST00000262291 SUMO2P61956 95 aaKnown RBP9.96□□□□□ -0.81
VMP1-201ENST00000262291 SUMO4Q6EEV6 95 aa9.96□□□□□ -0.81
VMP1-201ENST00000262291 SMIM2Q9BVW6 85 aa9.96□□□□□ -0.81
VMP1-201ENST00000262291 XCL2Q9UBD3 114 aa9.96□□□□□ -0.81
VMP1-201ENST00000262291 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.82
VMP1-201ENST00000262291 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
VMP1-201ENST00000262291 LAGE3Q14657 143 aa9.96□□□□□ -0.82
VMP1-201ENST00000262291 SMIM20Q8N5G0 67 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms