RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 PLEKHB2Q96CS7 222 aa2.79□□□□□ -1.96
CDRT1-201ENST00000261644 USMG5Q96IX5 58 aa2.79□□□□□ -1.96
CDRT1-201ENST00000261644 METTL26Q96S19 204 aa2.79□□□□□ -1.96
CDRT1-201ENST00000261644 TMEM126AQ9H061 195 aa2.79□□□□□ -1.96
CDRT1-201ENST00000261644 PRORYQ9H606 182 aa2.79□□□□□ -1.96
CDRT1-201ENST00000261644 ZNF256Q9Y2P7 627 aaPredicted RBP2.79□□□□□ -1.96
CDRT1-201ENST00000261644 SELENOKQ9Y6D0 94 aa2.79□□□□□ -1.96
CDRT1-201ENST00000261644 IGHV3-72A0A0B4J1Y9 119 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 TRAV26-2A0A0B4J265 109 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 TMEM223A0PJW6 202 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 ZNF815PA8K554 130 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 PRAC2D3DTV9 90 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 M0R2P5 195 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 NDUFA4O00483 81 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 SLC25A20O43772 301 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 MT-ATP8P03928 68 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 RNASE3P12724 160 aaKnown RBP2.78□□□□□ -1.96
CDRT1-201ENST00000261644 GATA1P15976 413 aaPredicted RBP2.78□□□□□ -1.96
CDRT1-201ENST00000261644 ZNF22P17026 224 aaPredicted RBP2.78□□□□□ -1.96
CDRT1-201ENST00000261644 INSL3P51460 131 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 UBE2E1P51965 193 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
CDRT1-201ENST00000261644 SRSF9Q13242 221 aaKnown RBP eCLIP2.78□□□□□ -1.96
CDRT1-201ENST00000261644 ATXN8Q156A1 80 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 ATP1A1-AS1Q5TC04 95 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 SPANXN1Q5VSR9 72 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 FAM19A3Q7Z5A8 133 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 VMO1Q7Z5L0 202 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 OR10J6PQ8NGY7 276 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 EEF1AKMT3Q96AZ1 226 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 NAA38Q9BRA0 125 aaKnown RBP2.78□□□□□ -1.96
CDRT1-201ENST00000261644 TTTY13Q9BZ97 58 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 DYNLRB1Q9NP97 96 aa2.78□□□□□ -1.96
CDRT1-201ENST00000261644 TECTAO75443 2155 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 TMSB15BA0A087X1C1 80 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 IGHV3-21A0A0B4J1V1 117 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 TRGV3P03979 118 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 PSMB2P49721 201 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 EFNA4P52798 201 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 NDUFV3P56181 108 aaKnown RBP2.77□□□□□ -1.97
CDRT1-201ENST00000261644 FXYD7P58549 80 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 MRPS36P82909 103 aaKnown RBP2.77□□□□□ -1.97
CDRT1-201ENST00000261644 NDPQ00604 133 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 DEFB109BQ30KR1 87 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 C15orf32Q32M92 178 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 C9orf85Q96MD7 179 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 KIR2DL4Q99706 377 aa2.77□□□□□ -1.97
CDRT1-201ENST00000261644 TIMM8BQ9Y5J9 83 aaPredicted RBP2.77□□□□□ -1.97
CDRT1-201ENST00000261644 RANBP2P49792 3224 aaKnown RBP2.76□□□□□ -1.97
CDRT1-201ENST00000261644 A0A087WZ39 114 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 SPAARA0A1B0GVQ0 90 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 A8MTW9 85 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 J3QQQ9 107 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 M0QY20 66 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 COX6CP09669 75 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 IGHV4-31P0DP07 118 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 ID1P41134 155 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 CXCL5P42830 114 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 HES1Q14469 280 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 TTC32Q5I0X7 151 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 TMEM170BQ5T4T1 132 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 C11orf71Q6IPW1 123 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 Q6ZVQ6 151 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 C15orf53Q8NAA6 179 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 C20orf203Q8NBC4 194 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 ZNRF2Q8NHG8 242 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 Q8TAT8 98 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 COPS9Q8WXC6 57 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 LITAFQ99732 161 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 LINC00467Q9BRT7 94 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 ANAPC13Q9BS18 74 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 TIMM21Q9BVV7 248 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 PHLDA3Q9Y5J5 127 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 USP34Q70CQ2 3546 aa2.76□□□□□ -1.97
CDRT1-201ENST00000261644 REV3LO60673 3130 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 LAMA2P24043 3122 aaKnown RBP2.75□□□□□ -1.97
CDRT1-201ENST00000261644 URB1O60287 2271 aaKnown RBP2.75□□□□□ -1.97
CDRT1-201ENST00000261644 ICE1Q9Y2F5 2266 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 IGLV5-45A0A087WSX0 123 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 IGHV1-58A0A0C4DH39 117 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 TINCRA0A1B0GVN0 87 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 LST1O00453 97 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 CDK2AP2O75956 126 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 SNCGO76070 127 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 DUSP14O95147 198 aaKnown RBP2.75□□□□□ -1.97
CDRT1-201ENST00000261644 LGALS3P17931 250 aaKnown RBP2.75□□□□□ -1.97
CDRT1-201ENST00000261644 COX7A1P24310 79 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 FAM222AQ5U5X8 452 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 TRPT1Q86TN4 253 aaKnown RBP2.75□□□□□ -1.97
CDRT1-201ENST00000261644 TMEM219Q86XT9 240 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 C5orf56Q8N8D9 126 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 KLHL30-AS1Q8NEE0 82 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 RETNQ9HD89 108 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 VCANP13611 3396 aa2.75□□□□□ -1.97
CDRT1-201ENST00000261644 SVILO95425 2214 aa2.74□□□□□ -1.97
CDRT1-201ENST00000261644 TRAV2A0A0B4J234 112 aa2.74□□□□□ -1.97
CDRT1-201ENST00000261644 LOC107984156A0A0G2JMH3 177 aa2.74□□□□□ -1.97
CDRT1-201ENST00000261644 A0A1B0GVY2 172 aa2.74□□□□□ -1.97
CDRT1-201ENST00000261644 A0A1B0GX51 115 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms