RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 AKAP6Q13023 2319 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 B5MCH6 92 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 IGHV3-11P01762 117 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 IFITM1P13164 125 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 TSPEAR-AS2P59090 65 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 MRPL23Q16540 153 aaKnown RBP8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 TTC32Q5I0X7 151 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 APRG1Q8IVJ8 170 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 VPREB3Q9UKI3 123 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 KIF25-AS1Q9Y6Z4 181 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 ITPR1Q14643 2758 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 DCHS2Q6V1P9 2916 aa8.07□□□□□ -1.12
CHRNA1-201ENST00000261007 LEPROTO15243 131 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 IGHV4-59P01825 116 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 IGHV4-31P0DP07 118 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 ID1P41134 155 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 ANXA2RQ3ZCQ2 193 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 RHPN1-AS1Q9BWJ2 59 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 RELNP78509 3460 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 A0A0J9YX75 114 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 A4D1N5 150 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 ELANEP08246 267 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 LINC00315P59091 139 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 Q6YL49 198 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 Q8N1Y9 231 aa8.06□□□□□ -1.12
CHRNA1-201ENST00000261007 LINC01620Q4KN68 170 aa8.05□□□□□ -1.12
CHRNA1-201ENST00000261007 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
CHRNA1-201ENST00000261007 C20orf173Q96LM9 149 aa8.05□□□□□ -1.12
CHRNA1-201ENST00000261007 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TRBV6-5A0A0K0K1A5 114 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TRBV30A0A0K0K1B3 111 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TRBV10-2A0A0K0K1G8 114 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 RNASE3P12724 160 aaKnown RBP8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 RPL11P62913 178 aaKnown RBP8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 NTN5Q8WTR8 489 aaPredicted RBP8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 RAX2Q96IS3 184 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TRAV8-4A0A0B4J246 113 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 SDHAF1A6NFY7 115 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 CACNA1BQ00975 2339 aa8.04□□□□□ -1.12
CHRNA1-201ENST00000261007 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
CHRNA1-201ENST00000261007 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
CHRNA1-201ENST00000261007 EMP1P54849 157 aa8.03□□□□□ -1.12
CHRNA1-201ENST00000261007 LGALS9O00182 355 aa8.02□□□□□ -1.12
CHRNA1-201ENST00000261007 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.12
CHRNA1-201ENST00000261007 ODF3Q96PU9 254 aa8.02□□□□□ -1.12
CHRNA1-201ENST00000261007 M0R2P5 195 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 GNRH2O43555 120 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 SPRY2O43597 315 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 CRLF1O75462 422 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 RNASE4P34096 147 aaKnown RBP8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 RHOHQ15669 191 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 SUMO4Q6EEV6 95 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 RNF152Q8N8N0 203 aa8.02□□□□□ -1.13
CHRNA1-201ENST00000261007 H3BMM0 161 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 J3KRW8 73 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 ACACBO00763 2458 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 RPL39P62891 51 aaKnown RBP8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 NSUN5P1Q3KNT7 163 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 UBE2WQ96B02 151 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 TRAV2A0A0B4J234 112 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 H3BT86 120 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 CCDC179H3BU77 68 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 TMEM95Q3KNT9 176 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 CFAP161Q6P656 301 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 TMEM86BQ8N661 226 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 C15orf53Q8NAA6 179 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 ZNF702PQ9H963 129 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 MDFICQ9P1T7 246 aa8.01□□□□□ -1.13
CHRNA1-201ENST00000261007 SNRPD3P62318 126 aaKnown RBP8□□□□□ -1.13
CHRNA1-201ENST00000261007 Q1RN00 199 aa8□□□□□ -1.13
CHRNA1-201ENST00000261007 DEFB121Q5J5C9 76 aa8□□□□□ -1.13
CHRNA1-201ENST00000261007 Q8N2B8 174 aa8□□□□□ -1.13
CHRNA1-201ENST00000261007 PRRC2AP48634 2157 aaKnown RBP7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 Q96MF0 132 aa7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 TEX49A0A1B0GTD5 131 aa7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 MAPK1IP1LQ8NDC0 245 aa7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
CHRNA1-201ENST00000261007 IGSF10Q6WRI0 2623 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 A0A0J9YXY3 114 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 KLLNB2CW77 178 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 TRIAP1O43715 76 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 KRTAP10-9P60411 292 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 FAM159AQ6UWV7 190 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 SPTAN1Q13813 2472 aaKnown RBP7.98□□□□□ -1.13
CHRNA1-201ENST00000261007 TACC2O95359 2948 aa7.97□□□□□ -1.13
CHRNA1-201ENST00000261007 CR1P17927 2039 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms