RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IGHV3-30-3P0DP02 117 aa16.44■□□□□ 0.22
SDF2L1-201ENST00000248958 IGHV3-30-5P0DP03 117 aa16.44■□□□□ 0.22
SDF2L1-201ENST00000248958 FOXA3P55318 350 aaPredicted RBP16.44■□□□□ 0.22
SDF2L1-201ENST00000248958 TMEM97Q5BJF2 176 aa16.44■□□□□ 0.22
SDF2L1-201ENST00000248958 GTSF1Q8WW33 167 aa16.44■□□□□ 0.22
SDF2L1-201ENST00000248958 RAB14P61106 215 aa16.43■□□□□ 0.22
SDF2L1-201ENST00000248958 DAZ4Q86SG3 579 aaKnown RBP16.43■□□□□ 0.22
SDF2L1-201ENST00000248958 C15orf54Q8N8G6 183 aa16.43■□□□□ 0.22
SDF2L1-201ENST00000248958 GFRA4Q9GZZ7 299 aa16.43■□□□□ 0.22
SDF2L1-201ENST00000248958 DAZ3Q9NR90 486 aaKnown RBP16.43■□□□□ 0.22
SDF2L1-201ENST00000248958 TNFRSF18Q9Y5U5 241 aa16.43■□□□□ 0.22
SDF2L1-201ENST00000248958 FAM231BA6NCW3 169 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 LAGE3Q14657 143 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 SUMO4Q6EEV6 95 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 SMIM15Q7Z3B0 74 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 BORCS7Q96B45 105 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 NAT8Q9UHE5 227 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 URGCP-MRPS24S4R325 110 aa16.42■□□□□ 0.22
SDF2L1-201ENST00000248958 C9JQL5 133 aa16.41■□□□□ 0.22
SDF2L1-201ENST00000248958 M0QY20 66 aa16.41■□□□□ 0.22
SDF2L1-201ENST00000248958 TSKUQ8WUA8 353 aa16.41■□□□□ 0.22
SDF2L1-201ENST00000248958 CHCHD7Q9BUK0 85 aa16.41■□□□□ 0.22
SDF2L1-201ENST00000248958 EREGO14944 169 aa16.4■□□□□ 0.22
SDF2L1-201ENST00000248958 SRSF3P84103 164 aaKnown RBP16.4■□□□□ 0.22
SDF2L1-201ENST00000248958 RASL11AQ6T310 242 aa16.4■□□□□ 0.22
SDF2L1-201ENST00000248958 ISOC2Q96AB3 205 aa16.4■□□□□ 0.22
SDF2L1-201ENST00000248958 TRBV6-8A0A0A6YYG3 113 aa16.39■□□□□ 0.21
SDF2L1-201ENST00000248958 RPL23P62829 140 aaKnown RBP16.39■□□□□ 0.21
SDF2L1-201ENST00000248958 KCNIP4Q6PIL6 250 aa16.39■□□□□ 0.21
SDF2L1-201ENST00000248958 NIT1Q86X76 327 aa16.39■□□□□ 0.21
SDF2L1-201ENST00000248958 PGLYRP4Q96LB8 373 aa16.39■□□□□ 0.21
SDF2L1-201ENST00000248958 PKIAP61925 76 aa16.37■□□□□ 0.21
SDF2L1-201ENST00000248958 FRZBQ92765 325 aa16.37■□□□□ 0.21
SDF2L1-201ENST00000248958 NIT2Q9NQR4 276 aa16.37■□□□□ 0.21
SDF2L1-201ENST00000248958 A0A087WX48 190 aa16.36■□□□□ 0.21
SDF2L1-201ENST00000248958 TRAV8-3A0A0A6YYJ7 113 aa16.36■□□□□ 0.21
SDF2L1-201ENST00000248958 ELOBQ15370 118 aa16.36■□□□□ 0.21
SDF2L1-201ENST00000248958 ADIRFQ15847 76 aa16.36■□□□□ 0.21
SDF2L1-201ENST00000248958 V9GYV3 84 aa16.36■□□□□ 0.21
SDF2L1-201ENST00000248958 PKD1P98161 4303 aa16.36■□□□□ 0.21
SDF2L1-201ENST00000248958 HIGD1CA8MV81 97 aa16.35■□□□□ 0.21
SDF2L1-201ENST00000248958 PSCAO43653 123 aa16.35■□□□□ 0.21
SDF2L1-201ENST00000248958 SPATA12Q7Z6I5 190 aa16.35■□□□□ 0.21
SDF2L1-201ENST00000248958 A0A1B0GUT8 65 aa16.34■□□□□ 0.21
SDF2L1-201ENST00000248958 TM2D2Q9BX73 214 aa16.34■□□□□ 0.21
SDF2L1-201ENST00000248958 C16orf90A8MZG2 172 aa16.33■□□□□ 0.2
SDF2L1-201ENST00000248958 Q9HAA7 133 aa16.33■□□□□ 0.2
SDF2L1-201ENST00000248958 A0A087WTM6 91 aa16.32■□□□□ 0.2
SDF2L1-201ENST00000248958 Q8N3U1 123 aa16.32■□□□□ 0.2
SDF2L1-201ENST00000248958 TRBV25-1A0A075B6N4 114 aa16.31■□□□□ 0.2
SDF2L1-201ENST00000248958 TMEM262E9PQX1 116 aa16.31■□□□□ 0.2
SDF2L1-201ENST00000248958 NTM-AS1Q6ZSK4 140 aa16.31■□□□□ 0.2
SDF2L1-201ENST00000248958 NAT8BQ9UHF3 227 aa16.31■□□□□ 0.2
SDF2L1-201ENST00000248958 CLLU1Q5K131 121 aa16.3■□□□□ 0.2
SDF2L1-201ENST00000248958 GATD1Q8NB37 220 aa16.3■□□□□ 0.2
SDF2L1-201ENST00000248958 RMI2Q96E14 147 aa16.3■□□□□ 0.2
SDF2L1-201ENST00000248958 CHCHD5Q9BSY4 110 aa16.3■□□□□ 0.2
SDF2L1-201ENST00000248958 PGPEP1Q9NXJ5 209 aa16.3■□□□□ 0.2
SDF2L1-201ENST00000248958 COX11Q9Y6N1 276 aa16.3■□□□□ 0.2
SDF2L1-201ENST00000248958 IGHV1-24A0A0C4DH33 117 aa16.29■□□□□ 0.2
SDF2L1-201ENST00000248958 RIGQ13278 110 aa16.29■□□□□ 0.2
SDF2L1-201ENST00000248958 IQCJQ1A5X6 159 aa16.29■□□□□ 0.2
SDF2L1-201ENST00000248958 TMEM191AQ9H0A3 160 aa16.29■□□□□ 0.2
SDF2L1-201ENST00000248958 KIAA1109Q2LD37 5005 aa16.29■□□□□ 0.2
SDF2L1-201ENST00000248958 CDPF1Q6NVV7 123 aa16.28■□□□□ 0.2
SDF2L1-201ENST00000248958 NUP35Q8NFH5 326 aa16.28■□□□□ 0.2
SDF2L1-201ENST00000248958 KLK12Q9UKR0 248 aa16.28■□□□□ 0.2
SDF2L1-201ENST00000248958 KRTAP10-2P60368 255 aa16.27■□□□□ 0.2
SDF2L1-201ENST00000248958 Q0VG73 95 aa16.27■□□□□ 0.2
SDF2L1-201ENST00000248958 DNAH11Q96DT5 4516 aa16.27■□□□□ 0.2
SDF2L1-201ENST00000248958 SMIM27A0A1W2PRY6 76 aa16.26■□□□□ 0.19
SDF2L1-201ENST00000248958 TRAV26-2A0A0B4J265 109 aa16.25■□□□□ 0.19
SDF2L1-201ENST00000248958 COTL1Q14019 142 aa16.25■□□□□ 0.19
SDF2L1-201ENST00000248958 MPV17L2Q567V2 206 aa16.24■□□□□ 0.19
SDF2L1-201ENST00000248958 ATRAIDQ6UW56 229 aa16.24■□□□□ 0.19
SDF2L1-201ENST00000248958 UBE2WQ96B02 151 aa16.24■□□□□ 0.19
SDF2L1-201ENST00000248958 LRCOL1A6NCL2 159 aa16.23■□□□□ 0.19
SDF2L1-201ENST00000248958 PNRC1Q12796 327 aaPredicted RBP16.23■□□□□ 0.19
SDF2L1-201ENST00000248958 PKHD1P08F94 4074 aa16.23■□□□□ 0.19
SDF2L1-201ENST00000248958 DYNC1H1Q14204 4646 aaKnown RBP16.22■□□□□ 0.19
SDF2L1-201ENST00000248958 A0A1B0GW15 77 aa16.22■□□□□ 0.19
SDF2L1-201ENST00000248958 CRPP02741 224 aa16.22■□□□□ 0.19
SDF2L1-201ENST00000248958 MRAP2Q96G30 205 aa16.22■□□□□ 0.19
SDF2L1-201ENST00000248958 TMEM243Q9BU79 118 aa16.22■□□□□ 0.19
SDF2L1-201ENST00000248958 PPP1R2P9O14990 202 aa16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 NCR2O95944 276 aa16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 ANGP03950 147 aaKnown RBP16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 RAB4AP20338 218 aa16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 IFITM2Q01629 132 aa16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 GAGE6Q13070 117 aa16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 RPL39LQ96EH5 51 aaKnown RBP16.21■□□□□ 0.19
SDF2L1-201ENST00000248958 TRBV6-5A0A0K0K1A5 114 aa16.2■□□□□ 0.18
SDF2L1-201ENST00000248958 PCLOQ9Y6V0 5065 aa16.19■□□□□ 0.18
SDF2L1-201ENST00000248958 IGKV2D-24A0A075B6R9 120 aa16.19■□□□□ 0.18
SDF2L1-201ENST00000248958 AMTP48728 403 aa16.19■□□□□ 0.18
SDF2L1-201ENST00000248958 RBX1P62877 108 aa16.19■□□□□ 0.18
SDF2L1-201ENST00000248958 Q8N976 141 aa16.19■□□□□ 0.18
SDF2L1-201ENST00000248958 RNF185Q96GF1 192 aa16.19■□□□□ 0.18
SDF2L1-201ENST00000248958 A0A1B0GUV1 79 aa16.18■□□□□ 0.18
SDF2L1-201ENST00000248958 SDHAF1A6NFY7 115 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms