RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
DDX55-201ENST00000238146 NBL1P41271 181 aa11.49□□□□□ -0.57
DDX55-201ENST00000238146 ZNF580Q9UK33 172 aa11.49□□□□□ -0.57
DDX55-201ENST00000238146 TRAV12-2A0A075B6T6 113 aa11.49□□□□□ -0.57
DDX55-201ENST00000238146 GATA3P23771 443 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 Q8N1Y9 231 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 CITED1Q99966 193 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 IGF2RP11717 2491 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 H3BUX3 64 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 M0R2P5 195 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
DDX55-201ENST00000238146 IGLV4-3A0A075B6K6 122 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 A0A0J9YX75 114 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 HIVEP3Q5T1R4 2406 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
DDX55-201ENST00000238146 K7EMT4 169 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 TEX29Q8N6K0 151 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
DDX55-201ENST00000238146 A0A0J9YXY3 114 aa11.46□□□□□ -0.57
DDX55-201ENST00000238146 A6NDX4 124 aa11.46□□□□□ -0.57
DDX55-201ENST00000238146 Q1RN00 199 aa11.46□□□□□ -0.57
DDX55-201ENST00000238146 NTN5Q8WTR8 489 aaPredicted RBP11.46□□□□□ -0.57
DDX55-201ENST00000238146 I3L3M4 83 aa11.46□□□□□ -0.58
DDX55-201ENST00000238146 LINC01620Q4KN68 170 aa11.46□□□□□ -0.58
DDX55-201ENST00000238146 ATXN8Q156A1 80 aa11.45□□□□□ -0.58
DDX55-201ENST00000238146 ODF3Q96PU9 254 aa11.45□□□□□ -0.58
DDX55-201ENST00000238146 VPS13CQ709C8 3753 aa11.45□□□□□ -0.58
DDX55-201ENST00000238146 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
DDX55-201ENST00000238146 IGHV4-39P01824 125 aa11.44□□□□□ -0.58
DDX55-201ENST00000238146 IGHV3-30-3P0DP02 117 aa11.44□□□□□ -0.58
DDX55-201ENST00000238146 SPXQ9BT56 116 aa11.44□□□□□ -0.58
DDX55-201ENST00000238146 IGHV1OR15-1A0A075B7D0 117 aa11.44□□□□□ -0.58
DDX55-201ENST00000238146 LITAFQ99732 161 aa11.44□□□□□ -0.58
DDX55-201ENST00000238146 BEX4Q9NWD9 120 aaPredicted RBP11.44□□□□□ -0.58
DDX55-201ENST00000238146 SVIPQ8NHG7 77 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 TRBV30A0A0K0K1B3 111 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 TRIAP1O43715 76 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 CFHR3Q02985 330 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 SPINK13Q1W4C9 94 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 FAM104AQ969W3 186 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 LINC01600Q96MT4 127 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 COL12A1Q99715 3063 aa11.43□□□□□ -0.58
DDX55-201ENST00000238146 IGHV4-61A0A0C4DH41 118 aa11.42□□□□□ -0.58
DDX55-201ENST00000238146 TEX49A0A1B0GTD5 131 aa11.42□□□□□ -0.58
DDX55-201ENST00000238146 CRLF1O75462 422 aa11.42□□□□□ -0.58
DDX55-201ENST00000238146 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
DDX55-201ENST00000238146 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
DDX55-201ENST00000238146 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
DDX55-201ENST00000238146 TRAV8-3A0A0A6YYJ7 113 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 TRBV10-2A0A0K0K1G8 114 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 SNCGO76070 127 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 PRSS2P07478 247 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 RPL13AP40429 203 aaKnown RBP11.41□□□□□ -0.58
DDX55-201ENST00000238146 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
DDX55-201ENST00000238146 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 ADAMTSL4-AS1Q5T5F5 129 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
DDX55-201ENST00000238146 CD28P10747 220 aa11.4□□□□□ -0.58
DDX55-201ENST00000238146 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.58
DDX55-201ENST00000238146 TMEM95Q3KNT9 176 aa11.4□□□□□ -0.58
DDX55-201ENST00000238146 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
DDX55-201ENST00000238146 SORL1Q92673 2214 aa11.4□□□□□ -0.58
DDX55-201ENST00000238146 CEMP1Q6PRD7 247 aaPredicted RBP11.4□□□□□ -0.59
DDX55-201ENST00000238146 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
DDX55-201ENST00000238146 K7EQG2 157 aa11.39□□□□□ -0.59
DDX55-201ENST00000238146 GAGE5Q13069 117 aa11.39□□□□□ -0.59
DDX55-201ENST00000238146 GAGE6Q13070 117 aa11.39□□□□□ -0.59
DDX55-201ENST00000238146 C19orf84I3L1E1 186 aa11.38□□□□□ -0.59
DDX55-201ENST00000238146 IGHV1-58A0A0C4DH39 117 aa11.38□□□□□ -0.59
DDX55-201ENST00000238146 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
DDX55-201ENST00000238146 ICOSQ9Y6W8 199 aa11.38□□□□□ -0.59
DDX55-201ENST00000238146 DOPEY2Q9Y3R5 2298 aa11.38□□□□□ -0.59
DDX55-201ENST00000238146 IGHV3-73A0A0B4J1V6 119 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 TRAV8-4A0A0B4J246 113 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 PSMB8P28062 276 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 PROK1P58294 105 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 NDUFA12Q9UI09 145 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.37□□□□□ -0.593e-7■■■■■ 28.1
DDX55-201ENST00000238146 H3BMM0 161 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 UCNP55089 124 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 NDUFV3P56181 108 aaKnown RBP11.37□□□□□ -0.59
DDX55-201ENST00000238146 C10orf99Q6UWK7 81 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 SPANXDQ9BXN6 97 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
DDX55-201ENST00000238146 H7C423 109 aa11.36□□□□□ -0.59
DDX55-201ENST00000238146 C2orf82Q6UX34 121 aa11.36□□□□□ -0.59
DDX55-201ENST00000238146 Q6ZSV7 163 aa11.36□□□□□ -0.59
DDX55-201ENST00000238146 SS18L2Q9UHA2 77 aa11.36□□□□□ -0.59
DDX55-201ENST00000238146 TRGV11A0A075B6L2 103 aa11.36□□□□□ -0.59
DDX55-201ENST00000238146 A8MZ25 164 aa11.36□□□□□ -0.59
DDX55-201ENST00000238146 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
DDX55-201ENST00000238146 PIMREGQ9BSJ6 248 aa11.35□□□□□ -0.59
DDX55-201ENST00000238146 EDA2RQ9HAV5 297 aa11.35□□□□□ -0.59
DDX55-201ENST00000238146 B5MCH6 92 aa11.35□□□□□ -0.59
DDX55-201ENST00000238146 RBMY1A1P0DJD3 496 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms