RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
PCDHB3-201ENST00000231130 CDSNQ15517 529 aa10.67□□□□□ -0.7
PCDHB3-201ENST00000231130 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
PCDHB3-201ENST00000231130 TRIAP1O43715 76 aa10.67□□□□□ -0.7
PCDHB3-201ENST00000231130 SRSF2Q01130 221 aaKnown RBP10.67□□□□□ -0.7
PCDHB3-201ENST00000231130 KLRB1Q12918 225 aa10.67□□□□□ -0.7
PCDHB3-201ENST00000231130 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
PCDHB3-201ENST00000231130 J3KT08 172 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 PSMG3-AS1Q96PY0 264 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 SPXQ9BT56 116 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 ODF3BA8MYP8 253 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 SAA4P35542 130 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 MUC4Q99102 2169 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
PCDHB3-201ENST00000231130 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.7
PCDHB3-201ENST00000231130 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
PCDHB3-201ENST00000231130 DUX5Q96PT3 197 aa10.65□□□□□ -0.7
PCDHB3-201ENST00000231130 Q6ZSV7 163 aa10.65□□□□□ -0.7
PCDHB3-201ENST00000231130 HIVEP3Q5T1R4 2406 aa10.65□□□□□ -0.71
PCDHB3-201ENST00000231130 M0R2P5 195 aa10.65□□□□□ -0.71
PCDHB3-201ENST00000231130 LY6EQ16553 131 aa10.65□□□□□ -0.71
PCDHB3-201ENST00000231130 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.71
PCDHB3-201ENST00000231130 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.71
PCDHB3-201ENST00000231130 CRYGDP07320 174 aa10.64□□□□□ -0.71
PCDHB3-201ENST00000231130 HTN1P15515 57 aa10.64□□□□□ -0.71
PCDHB3-201ENST00000231130 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
PCDHB3-201ENST00000231130 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
PCDHB3-201ENST00000231130 H7C423 109 aa10.64□□□□□ -0.71
PCDHB3-201ENST00000231130 UBE2E1P51965 193 aa10.64□□□□□ -0.71
PCDHB3-201ENST00000231130 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.63□□□□□ -0.71
PCDHB3-201ENST00000231130 M0R1W7 72 aa10.63□□□□□ -0.71
PCDHB3-201ENST00000231130 ZFAND2AQ8N6M9 145 aa10.63□□□□□ -0.71
PCDHB3-201ENST00000231130 LINC00477Q96M19 166 aa10.63□□□□□ -0.71
PCDHB3-201ENST00000231130 TSHBP01222 138 aa10.62□□□□□ -0.71
PCDHB3-201ENST00000231130 BRD3OSQ6XYD6 125 aa10.62□□□□□ -0.71
PCDHB3-201ENST00000231130 Q8N6K4 173 aa10.62□□□□□ -0.71
PCDHB3-201ENST00000231130 hADV29S1A0JD25 119 aa10.62□□□□□ -0.71
PCDHB3-201ENST00000231130 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
PCDHB3-201ENST00000231130 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
PCDHB3-201ENST00000231130 ZNF580Q9UK33 172 aa10.61□□□□□ -0.71
PCDHB3-201ENST00000231130 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 UQCRQO14949 82 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 P0DMU3 169 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 FAM231AP0DMU4 169 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 FAM231CP0DMU5 169 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 RNASE13Q5GAN3 156 aaKnown RBP10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 ICOSQ9Y6W8 199 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 VPS13CQ709C8 3753 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 A0A0U1RRA0 63 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 RNASE3P12724 160 aaKnown RBP10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 EDN2P20800 178 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 CRYBG3Q68DQ2 2970 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 GPHB5Q86YW7 130 aa10.6□□□□□ -0.71
PCDHB3-201ENST00000231130 SUMO4Q6EEV6 95 aa10.59□□□□□ -0.71
PCDHB3-201ENST00000231130 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
PCDHB3-201ENST00000231130 USP9YO00507 2555 aaPredicted RBP10.59□□□□□ -0.71
PCDHB3-201ENST00000231130 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
PCDHB3-201ENST00000231130 IGHV3-73A0A0B4J1V6 119 aa10.59□□□□□ -0.71
PCDHB3-201ENST00000231130 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
PCDHB3-201ENST00000231130 NSUN5P1Q3KNT7 163 aa10.58□□□□□ -0.72
PCDHB3-201ENST00000231130 SPTBN4Q9H254 2564 aa10.58□□□□□ -0.72
PCDHB3-201ENST00000231130 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
PCDHB3-201ENST00000231130 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 A0A0B4J2C4 111 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 MINOS1Q5TGZ0 78 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 MINOS1-NBL1R4GNA1 71 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 TRAV13-1A0A0B4J241 112 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 HRCT1Q6UXD1 115 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 DAND5Q8N907 189 aa10.57□□□□□ -0.72
PCDHB3-201ENST00000231130 PRRC2AP48634 2157 aaKnown RBP10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 A0A0J9YXV3 536 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 RHOHQ15669 191 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 KLK9Q9UKQ9 250 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 H3BT86 120 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 VCYO14598 125 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 TRACP01848 142 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 EBI3Q14213 229 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 BPESC1Q9GZL8 116 aa10.56□□□□□ -0.72
PCDHB3-201ENST00000231130 SETD2Q9BYW2 2564 aaPredicted RBP10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 F5H768 121 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 LRRC75A-AS1Q8N1F1 130 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 KIR2DL5BQ8NHK3 375 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 DSCR8Q96T75 97 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 TRBV30A0A0K0K1B3 111 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 OVOL1O14753 267 aa10.55□□□□□ -0.72
PCDHB3-201ENST00000231130 SIRPDQ9H106 197 aa10.54□□□□□ -0.72
PCDHB3-201ENST00000231130 TRBV7-7A0A0K0K1E9 115 aa10.54□□□□□ -0.72
PCDHB3-201ENST00000231130 LINC00526Q96FQ7 95 aa10.54□□□□□ -0.72
PCDHB3-201ENST00000231130 A8MZ25 164 aa10.54□□□□□ -0.72
PCDHB3-201ENST00000231130 ITLN2Q8WWU7 325 aaPredicted RBP10.54□□□□□ -0.72
PCDHB3-201ENST00000231130 MYO9AB2RTY4 2548 aa10.54□□□□□ -0.72
PCDHB3-201ENST00000231130 CENPEQ02224 2701 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 CSMD2Q7Z408 3487 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 I3L3M4 83 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 C4orf26Q17RF5 130 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms