RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 H7C2G1 150 aa10.39□□□□□ -0.75
SCNN1A-201ENST00000228916 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
SCNN1A-201ENST00000228916 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
SCNN1A-201ENST00000228916 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
SCNN1A-201ENST00000228916 C9orf85Q96MD7 179 aa10.39□□□□□ -0.75
SCNN1A-201ENST00000228916 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
SCNN1A-201ENST00000228916 TRAV4A0A0B4J268 109 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 TRBV30A0A0K0K1B3 111 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 SNCGO76070 127 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 CRLF1O75462 422 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 NDUFV3P56181 108 aaKnown RBP10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 Q6Q795 121 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 HIVEP3Q5T1R4 2406 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 TRBV10-2A0A0K0K1G8 114 aa10.38□□□□□ -0.75
SCNN1A-201ENST00000228916 CELSR2Q9HCU4 2923 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 TRAV12-3A0A0B4J271 114 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 H3BUA1 57 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 IGHV3-11P01762 117 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 CFAP161Q6P656 301 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 IGHV3-64A0A075B6Q5 118 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 Q1RN00 199 aa10.37□□□□□ -0.75
SCNN1A-201ENST00000228916 IGLV4-3A0A075B6K6 122 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 KLRB1Q12918 225 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 ODF3Q96PU9 254 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 LITAFQ99732 161 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 TRIAP1O43715 76 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 ZNF56Q15929 161 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 DAZ1Q9NQZ3 744 aaKnown RBP10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 ZNF580Q9UK33 172 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 TEX49A0A1B0GTD5 131 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 B5MCH6 92 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 IGHV4-39P01824 125 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 BRD3OSQ6XYD6 125 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 DCANP1Q8TF63 244 aa10.36□□□□□ -0.75
SCNN1A-201ENST00000228916 ID1P41134 155 aa10.35□□□□□ -0.75
SCNN1A-201ENST00000228916 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
SCNN1A-201ENST00000228916 I3L3M4 83 aa10.34□□□□□ -0.75
SCNN1A-201ENST00000228916 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
SCNN1A-201ENST00000228916 IGHG2P01859 326 aa10.33□□□□□ -0.76
SCNN1A-201ENST00000228916 IFITM1P13164 125 aa10.33□□□□□ -0.76
SCNN1A-201ENST00000228916 H3BMM0 161 aa10.33□□□□□ -0.76
SCNN1A-201ENST00000228916 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
SCNN1A-201ENST00000228916 BEX4Q9NWD9 120 aaPredicted RBP10.33□□□□□ -0.76
SCNN1A-201ENST00000228916 EDN2P20800 178 aa10.33□□□□□ -0.76
SCNN1A-201ENST00000228916 CSMD2Q7Z408 3487 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 GAGE7O76087 117 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 GAGE12FP0CL80 117 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 GAGE12GP0CL81 117 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 GAGE12IP0CL82 117 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 PF4V1P10720 104 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 GAGE4Q13068 117 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 FAM104AQ969W3 186 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 K7EMT4 169 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 MRPS36P82909 103 aaKnown RBP10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
SCNN1A-201ENST00000228916 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 TIMM21Q9BVV7 248 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 ICOSQ9Y6W8 199 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 H7C423 109 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 SPXQ9BT56 116 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 H3BT86 120 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 LY6EQ16553 131 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 C2orf82Q6UX34 121 aa10.31□□□□□ -0.76
SCNN1A-201ENST00000228916 ITPR1Q14643 2758 aa10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 IGLV1-40P01703 118 aa10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 PRRC2AP48634 2157 aaKnown RBP10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
SCNN1A-201ENST00000228916 MRPL23Q16540 153 aaKnown RBP10.29□□□□□ -0.76
SCNN1A-201ENST00000228916 IGHV1-58A0A0C4DH39 117 aa10.29□□□□□ -0.76
SCNN1A-201ENST00000228916 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
SCNN1A-201ENST00000228916 PRSS2P07478 247 aa10.29□□□□□ -0.76
SCNN1A-201ENST00000228916 BLCAPP62952 87 aa10.29□□□□□ -0.76
SCNN1A-201ENST00000228916 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 CD28P10747 220 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 MIAQ16674 131 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 EDA2RQ9HAV5 297 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 FAM240AA0A1B0GVK7 77 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 DEFB121Q5J5C9 76 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
SCNN1A-201ENST00000228916 A6NDX4 124 aa10.27□□□□□ -0.76
SCNN1A-201ENST00000228916 COX6CP09669 75 aa10.27□□□□□ -0.76
SCNN1A-201ENST00000228916 C19orf84I3L1E1 186 aa10.27□□□□□ -0.77
SCNN1A-201ENST00000228916 LST1O00453 97 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms