RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BHQ93079 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BNQ99877 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BMQ99879 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 TRAV9-2A0A087WT02 112 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 IGHV3-16A0A0C4DH30 117 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 XKRY2A2RUG3 117 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 C5orf52A6NGY3 159 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 ORM1P02763 201 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 OR4C5Q8NGB2 326 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 A0A1B0GXF2 115 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 M0R2P5 195 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 MRPL54Q6P161 138 aaKnown RBP10.16□□□□□ -0.78
UPK3A-201ENST00000216211 MSRB1Q9NZV6 116 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 A0A087WTM6 91 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 HLA-DQA1P01909 254 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 GZMBP10144 247 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 EVI2AP22794 236 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 NDUFA6P56556 154 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 SNRPEP62304 92 aaKnown RBP10.15□□□□□ -0.78
UPK3A-201ENST00000216211 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
UPK3A-201ENST00000216211 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
UPK3A-201ENST00000216211 A0A1B0GW15 77 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 HBBP68871 147 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 RIGQ13278 110 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 COA6Q5JTJ3 125 aaKnown RBP10.13□□□□□ -0.79
UPK3A-201ENST00000216211 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 K7EP13 123 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 CRYGDP07320 174 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
UPK3A-201ENST00000216211 XGP55808 180 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 FAT1Q14517 4588 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 IGKV3D-20A0A0C4DH25 116 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 APCSP02743 223 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 S100A8P05109 93 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 CTRLP40313 264 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 RAB4BP61018 213 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 C11orf21Q9P2W6 132 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 TMSB15BA0A087X1C1 80 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 LYZL1Q6UWQ5 148 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 C10orf126Q8N4M7 172 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 HERC1Q15751 4861 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 F2Z2F3 143 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 RS1O15537 224 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 CAMPP49913 170 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 ZNF876PQ49A33 203 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 CFAP126Q5VTH2 177 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 SLC25A29Q8N8R3 303 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 DNAH8Q96JB1 4490 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-38A0A0C4DH36 116 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 TIRAPP58753 221 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 Q0VG73 95 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 GRIFINA4D1Z8 144 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 PSCAO43653 123 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 GCSHP23434 173 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 DNLZQ5SXM8 178 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 HIST3H2BBQ8N257 126 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 C9orf85Q96MD7 179 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 PRADC1Q9BSG0 188 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 SSBP4Q9BWG4 385 aaPredicted RBP10.07□□□□□ -0.8
UPK3A-201ENST00000216211 TRAV8-6A0A0B4J262 113 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 RHOHQ15669 191 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 Q5VSD8 79 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 TPPP3Q9BW30 176 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IBA57-AS1B1ANH7 110 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 SNAI2O43623 268 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 CIDEAO60543 219 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-30P01768 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-33P01772 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 OR5AL1P0C617 328 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-30-3P0DP02 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-30-5P0DP03 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 RNASE3P12724 160 aaKnown RBP10.05□□□□□ -0.8
UPK3A-201ENST00000216211 Q9HAA7 133 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IFITM10A6NMD0 228 aa10.04□□□□□ -0.8
UPK3A-201ENST00000216211 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms