RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 NTN5Q8WTR8 489 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-201ENST00000175756 TMEM141Q96I45 108 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
PTPN18-201ENST00000175756 LINC01587Q99440 93 aa12.88□□□□□ -0.35
PTPN18-201ENST00000175756 A0A0J9YY99 117 aa12.88□□□□□ -0.35
PTPN18-201ENST00000175756 PRM2P04554 102 aa12.88□□□□□ -0.35
PTPN18-201ENST00000175756 NRGNQ92686 78 aa12.88□□□□□ -0.35
PTPN18-201ENST00000175756 IGHV1OR15-1A0A075B7D0 117 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 TRAV26-1A0A087WT03 109 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 DEFB131AP59861 70 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 RPL13AP40429 203 aaKnown RBP12.87□□□□□ -0.35
PTPN18-201ENST00000175756 ZNF575Q86XF7 245 aa12.87□□□□□ -0.35
PTPN18-201ENST00000175756 TRBV20-1A0A075B6N2 111 aa12.86□□□□□ -0.35
PTPN18-201ENST00000175756 IGHV4-59P01825 116 aa12.86□□□□□ -0.35
PTPN18-201ENST00000175756 TRAV8-3A0A0A6YYJ7 113 aa12.86□□□□□ -0.35
PTPN18-201ENST00000175756 ZFAND6Q6FIF0 208 aa12.86□□□□□ -0.35
PTPN18-201ENST00000175756 PSMG3-AS1Q96PY0 264 aa12.86□□□□□ -0.35
PTPN18-201ENST00000175756 DAND5Q8N907 189 aa12.86□□□□□ -0.35
PTPN18-201ENST00000175756 CFC1BP0CG36 223 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 CFC1P0CG37 223 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 TEN1Q86WV5 123 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 PRRC2AP48634 2157 aaKnown RBP12.85□□□□□ -0.35
PTPN18-201ENST00000175756 C2orf82Q6UX34 121 aa12.85□□□□□ -0.35
PTPN18-201ENST00000175756 IGHV4-30-2A0A087WSY4 118 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 I3L3M4 83 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 HIST2H2BDQ6DRA6 164 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 IGHV4-4A0A075B6R2 117 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 IGHV3-53P01767 116 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 MSMBP08118 114 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 ZNRF2Q8NHG8 242 aa12.84□□□□□ -0.35
PTPN18-201ENST00000175756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.83□□□□□ -0.36
PTPN18-201ENST00000175756 IGKV2-29A2NJV5 120 aaPredicted RBP12.83□□□□□ -0.36
PTPN18-201ENST00000175756 TSPEAR-AS2P59090 65 aa12.83□□□□□ -0.36
PTPN18-201ENST00000175756 U3KQE9 123 aa12.83□□□□□ -0.36
PTPN18-201ENST00000175756 M0R2P5 195 aa12.83□□□□□ -0.36
PTPN18-201ENST00000175756 CFAP126Q5VTH2 177 aa12.83□□□□□ -0.36
PTPN18-201ENST00000175756 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
PTPN18-201ENST00000175756 NDUFA12Q9UI09 145 aa12.83□□□□□ -0.36
PTPN18-201ENST00000175756 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 PROK1P58294 105 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 A8MZ25 164 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 ZNF580Q9UK33 172 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 FLNBO75369 2602 aaKnown RBP12.82□□□□□ -0.36
PTPN18-201ENST00000175756 TRAV8-4A0A0B4J246 113 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 UBE2E2Q96LR5 201 aa12.82□□□□□ -0.36
PTPN18-201ENST00000175756 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.81□□□□□ -0.36
PTPN18-201ENST00000175756 ATXN8Q156A1 80 aa12.81□□□□□ -0.36
PTPN18-201ENST00000175756 IGHG2P01859 326 aa12.81□□□□□ -0.36
PTPN18-201ENST00000175756 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
PTPN18-201ENST00000175756 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 CRYGDP07320 174 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 Q6ZUT4 128 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 XGP55808 180 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 CIRBPQ14011 172 aaKnown RBP12.8□□□□□ -0.36
PTPN18-201ENST00000175756 DEFB112Q30KQ8 113 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 CLUHP3Q96NS8 147 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 TOMM7Q9P0U1 55 aa12.8□□□□□ -0.36
PTPN18-201ENST00000175756 DOPEY1Q5JWR5 2465 aa12.79□□□□□ -0.36
PTPN18-201ENST00000175756 MUC4Q99102 2169 aa12.79□□□□□ -0.36
PTPN18-201ENST00000175756 TIMM17AQ99595 171 aa12.79□□□□□ -0.36
PTPN18-201ENST00000175756 CRYBA4P53673 196 aa12.79□□□□□ -0.36
PTPN18-201ENST00000175756 TSHBP01222 138 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 SCGB1A1P11684 91 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 POLR2KP53803 58 aaKnown RBP12.78□□□□□ -0.36
PTPN18-201ENST00000175756 FLNCQ14315 2725 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 IGLV4-69A0A075B6H9 119 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 CRIP2P52943 208 aaPredicted RBP12.78□□□□□ -0.36
PTPN18-201ENST00000175756 XCL2Q9UBD3 114 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 IGIPA6NJ69 53 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 B4DSR2 109 aa12.78□□□□□ -0.36
PTPN18-201ENST00000175756 RHODO00212 210 aa12.77□□□□□ -0.36
PTPN18-201ENST00000175756 LEPROTO15243 131 aa12.77□□□□□ -0.36
PTPN18-201ENST00000175756 IGHV3-30P01768 117 aa12.77□□□□□ -0.36
PTPN18-201ENST00000175756 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.36
PTPN18-201ENST00000175756 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
PTPN18-201ENST00000175756 SPATA25Q9BR10 227 aa12.77□□□□□ -0.37
PTPN18-201ENST00000175756 C20orf203Q8NBC4 194 aa12.77□□□□□ -0.37
PTPN18-201ENST00000175756 B5MCH6 92 aa12.76□□□□□ -0.37
PTPN18-201ENST00000175756 IGHV3-30-3P0DP02 117 aa12.76□□□□□ -0.37
PTPN18-201ENST00000175756 SMCPP49901 116 aaPredicted RBP12.76□□□□□ -0.37
PTPN18-201ENST00000175756 UBE2D1P51668 147 aa12.76□□□□□ -0.37
PTPN18-201ENST00000175756 RNF183Q96D59 192 aa12.76□□□□□ -0.37
PTPN18-201ENST00000175756 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
PTPN18-201ENST00000175756 M0QY20 66 aa12.75□□□□□ -0.37
PTPN18-201ENST00000175756 CLEC2BQ92478 149 aa12.75□□□□□ -0.37
PTPN18-201ENST00000175756 SS18L2Q9UHA2 77 aa12.75□□□□□ -0.37
PTPN18-201ENST00000175756 A0A0J9YX75 114 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms