RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Igkv12-98A0A0G2JGF9 115 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm45871A0A1B0GRI9 540 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 P04212 136 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 SinhcafQ8C8M1 221 aaKnown RBP7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Dusp14Q9JLY7 198 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 DysfQ9ESD7 2090 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Spsb2O88838 264 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 GrhprQ91Z53 328 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Cysltr1Q99JA4 352 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 RprmQ9JJ72 109 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Sc5dO88822 299 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Saa3P04918 122 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Nkain3Q3URJ8 181 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm10604Q3V0X7 143 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Q8BG31 207 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Mrpl36Q99N90 102 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 MplkipQ9D011 178 aa7.96□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Plin4O88492 1403 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Luzp4B1AV09 449 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm15127B1AVZ5 449 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm15107B1B0X0 449 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igsf23B2RTN2 239 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Egr1P08046 533 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 HrkP62816 92 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Prss46Q5M8S2 314 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm15085Q62012 449 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Prb1Q91X93 504 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Arhgap21Q6DFV3 1944 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igkv3-2A0A075B5P0 119 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm29423A0A087WRM1 55 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igkv17-127A0A0G2JDN5 117 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Trbv29A0A0G2LB96 114 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm26727M0QWT1 121 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Smad7O35253 426 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Xaf1Q5NBU8 273 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Trav7d-3Q5R1I1 112 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Prima1Q810F0 153 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Snx22Q8C084 192 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Nrn1Q8CFV4 142 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 H2afb1Q9CQ70 111 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Lamtor2Q9JHS3 125 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Olfr1369-ps1A0A140T8K7 317 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tmem238A9JSM3 176 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Zfp936Q3ULA8 456 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Olfr263Q7TQT8 317 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Trav14d-3-dv8A0A075B619 120 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 P01670 111 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 P01671 111 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 P01672 111 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Rasl10bQ5SSG5 203 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Dmrt3Q80WT2 476 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Znhit1Q8R331 154 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tspan2Q922J6 221 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Arid2E9Q7E2 1828 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igkv4-68A0A0B4J1I7 117 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm9857F7CXR1 130 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Rs1Q9Z1L4 224 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tsc2Q61037 1814 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igkv12-46A0A140T8P6 115 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Ripply2Q2WG76 128 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Atg4dQ8BGV9 474 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Slc25a45Q8CFJ7 288 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 MavsQ8VCF0 503 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Col6a6Q8C6K9 2265 aa7.95□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Abca1P41233 2261 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Trav7-4A0A075B6C1 113 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Klk1b26P36369 261 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Trav7d-4Q5R1H9 113 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tet1Q3URK3 2007 aaKnown RBP7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Ighv1-15A0A0A6YXA5 117 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 H2-Ab1P01921 265 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 YrdcQ3U5F4 280 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Morn3Q8C5T4 241 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Olfr223Q8VF69 319 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Phf7Q9DAG9 307 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm21983D6RFS9 131 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Mrpl23O35972 146 aaKnown RBP7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Zic3Q62521 466 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 A930017K11RikE0CXQ2 571 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Lcn2P11672 200 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gtsf1lQ9CWD0 151 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 2410004P03RikA0A087WQY2 205 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Xcl1P47993 114 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 C1qaP98086 245 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Negr1Q80Z24 348 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Chac1Q8R3J5 223 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Ighv5-16A0A0B4J1P4 117 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tmem74bA2AU34 232 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tmem240B2RWJ3 173 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Ceacam1P31809 521 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 SNORCQ9CXL7 121 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Fam241aQ9CZL2 131 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Tmem131O70472 1877 aa7.94□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm13030A2APQ6 143 aa7.93□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Nat8b-psE0CYC6 232 aa7.93□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm609E9Q573 300 aa7.93□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm2381G3UY53 305 aa7.93□□□□□ -1.14
Col6a5-201ENSMUST00000165165 SdhcQ9CZB0 169 aaKnown RBP7.93□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igkv5-45A0A0B4J1J1 115 aa7.93□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Igkv5-39A0A0G2JDV4 115 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms