RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Gm10073E9Q3T0 114 aa11.41□□□□□ -0.58
Notch1-201ENSMUST00000028288 Shisa3Q3UPR0 238 aa11.41□□□□□ -0.58
Notch1-201ENSMUST00000028288 Tmem189Q99LQ7 271 aa11.41□□□□□ -0.58
Notch1-201ENSMUST00000028288 Sdk1Q3UH53 2193 aa11.41□□□□□ -0.58
Notch1-201ENSMUST00000028288 Nkain3Q3URJ8 181 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 BmfQ91ZE9 185 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Ifitm5O88728 134 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Gm45736A0A1B0GS18 427 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Mrpl51Q9CPY1 128 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Fam89bQ9QUI1 189 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Dctn5Q9QZB9 182 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Zfp983E9PUT0 460 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Gm17727E9Q4V7 109 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Wdr82Q8BFQ4 313 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 PgpQ8CHP8 321 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Tmem160Q9D938 188 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Sumo3Q9Z172 110 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Shisa6Q3UH99 525 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Cox19Q8K0C8 92 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Necap2Q9D1J1 266 aa11.4□□□□□ -0.58
Notch1-201ENSMUST00000028288 Tcrg-V4A0A0B4J1J8 138 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Fgf11P70378 225 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Ssbp4Q3U4B1 363 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 4930412O13RikQ9D5M9 106 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 AgrnA2ASQ1 1950 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Pcnx3Q8VI59 2028 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trav12d-1A0N8R0 115 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Pglyrp3A1A547 347 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Defa-rs7P50715 91 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Dnase2P56542 353 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Sfxn3Q91V61 321 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Efnb1P52795 345 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Efemp2Q9WVJ9 443 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Tcrg-V5A0A0G2JGV5 113 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Slc35d2Q762D5 326 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Tmem42Q9CR22 157 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 AmtnQ9D3J8 213 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Ren2P00796 401 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Olfr1350Q8VF34 308 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Dido1Q8C9B9 2256 aaKnown RBP11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trbv17A0A140T8P8 114 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 TbpP29037 316 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Pla2g5P97391 137 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Olfr761Q7TRJ0 323 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trav16A0A075B653 116 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Gm21976J3QNN2 249 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Olfr1380Q7TQT5 311 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Tmem101Q91VP7 257 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Cd200r5Q8BTP3 270 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 D930007J09RikQ9D2K6 131 aa11.39□□□□□ -0.59
Notch1-201ENSMUST00000028288 Olfr1382Q7TQT3 311 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Prss33Q80WM7 277 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 D630044L22RikQ8C701 164 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Hdgfl3Q9JMG7 202 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 St6galnac3Q9WUV2 305 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Slc25a35Q5SWT3 300 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Vsig8Q6P3A4 417 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Q8CF25 301 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Ifitm2Q99J93 144 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 H2al3Q9D4U4 128 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Rnf212F6TQD1 307 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Sc5dO88822 299 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Arl6ip6Q8BH07 226 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Olfr491Q8VG06 310 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 P04212 136 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Olfr223Q8VF69 319 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Tspan2Q922J6 221 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 Mrps36Q9CQX8 102 aa11.38□□□□□ -0.59
Notch1-201ENSMUST00000028288 OdamA1E960 273 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Hist1h2bmP10854 126 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trav3-3Q5R1C3 114 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Hist1h2bhQ64478 126 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Hist2h2bbQ64525 126 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Scrt1Q99M85 348 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Rasl11aQ6IMB1 242 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 H2-M10.4Q85ZW8 331 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Hyls1Q9CXX0 307 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 1110002E22RikE0CYV9 1786 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Ca11O70354 328 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 E030025P04RikA2A6V5 185 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Ormdl3Q9CPZ6 153 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Sdk2Q6V4S5 2176 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trav6n-5A0A075B621 112 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trav6-5A0A075B6B5 112 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Wipf3P0C7L0 485 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Nup210Q9QY81 1886 aaKnown RBP11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Trav3n-3A0A0G2JEM0 114 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Gm45844A0A1B0GRQ2 137 aa11.37□□□□□ -0.59
Notch1-201ENSMUST00000028288 Sumo2P61957 95 aaKnown RBP11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Prr23a3Q9CWP9 254 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Gm4881A0A140LIR9 352 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Slc25a53A2AF28 346 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 6430628N08RikA0A0U1RQ45 177 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Zfp950A0A0U1RQ46 609 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Gm20825J3QM67 227 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Ssty2Q149W4 227 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Otx1P80205 355 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Tmem177Q8BPE4 311 aa11.36□□□□□ -0.59
Notch1-201ENSMUST00000028288 Fmc1Q9CR13 113 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 96 ms