RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ankrd55Q8BLD6 626 aa9.17□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm5868Q8BJG1 145 aa9.17□□□□□ -0.94
Ciita-201ENSMUST00000023147 Bpifa5Q9CQX3 270 aa9.17□□□□□ -0.94
Ciita-201ENSMUST00000023147 CenpeQ6RT24 2474 aaKnown RBP9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Igkv4-51A0N8I8 119 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 9830107B12RikD3Z5D6 160 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm10130F6ZHM5 101 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Mesp1P97309 243 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Nkain3Q3URJ8 181 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Plxna4Q80UG2 1893 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Sfxn3Q91V61 321 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Mcm3apQ9WUU9 1971 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 AtrxQ61687 2476 aaKnown RBP9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm45717A0A1B0GT68 152 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Cd81P35762 236 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Bsph1Q3UW26 133 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Xaf1Q5NBU8 273 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Dda1Q9D9Z5 102 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Col9a3A2ACT7 680 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 AponG3X9D6 251 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm21900J3QP38 180 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Defa2P28309 93 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Anapc13Q8R034 74 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Olfr523Q8VFE7 317 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Olfr1012Q8VFJ7 311 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Q91WE4 72 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gatad1Q920S3 266 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Vgll1Q99NC0 307 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Trav7n-5A0A075B604 112 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Trav15-2-dv6-2A0A075B650 123 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Zfp983E9PUT0 460 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 P01746 140 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Tff1Q08423 87 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Olfr1258Q8VGN6 311 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Klf7Q99JB0 301 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Tmem54Q9D7S1 219 aa9.16□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm867A0A1W2P7T4 151 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Thap8E9Q695 213 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm6594J3QM43 95 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Fgf4P11403 202 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Tnfrsf9P20334 256 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Supt4h1aP63271 117 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 AgaQ64191 346 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Mpv17lQ99MS3 194 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Nup214Q80U93 2085 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm17727E9Q4V7 109 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm17732E9Q5I2 61 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Gm9772F6XPD8 135 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Adcyap1O70176 175 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Hist1h2bmP10854 126 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Fgf5P15656 264 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Hist1h2bhQ64478 126 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Hist2h2bbQ64525 126 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Prss33Q80WM7 277 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 PgpQ8CHP8 321 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Rnase2aQ8K196 155 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Olfr1323Q8VF35 309 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Hcfc2Q9D968 241 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 MalO09198 153 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Ca11O70354 328 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Tusc5Q8C838 173 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Lgals4Q8K419 326 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Spsb4Q8R5B6 273 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Q8VE95 218 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Olfr498Q8VEW2 330 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Trem3Q9JKE1 183 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Il17bQ9QXT6 180 aa9.15□□□□□ -0.94
Ciita-201ENSMUST00000023147 Igh-3P01867 404 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 Ly6aP05533 134 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 Spint3Q3UW09 88 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 RflnaQ7TS73 204 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 GaptQ8CB93 157 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 Derl1Q99J56 251 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 Hivep3A2A884 2348 aa9.15□□□□□ -0.95
Ciita-201ENSMUST00000023147 Mpig6bD7PDD4 242 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Ssbp4Q3U4B1 363 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Olfr148Q60887 310 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 C1ql2Q8CFR0 287 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Pnrc2Q9CR73 140 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Klf13Q9JJZ6 289 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Cabin1G3X8Q1 2187 aaKnown RBP9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Zfp27P10077 819 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Psg17Q62056 475 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 EtdQ80SW5 59 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Wdr82Q8BFQ4 313 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Gm17334Q8C6U3 126 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Gm5089A1L3C8 106 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Olfr1382Q7TQT3 311 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 ChtopQ9CY57 249 aaKnown RBP9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Vmn1r54Q9EPB8 315 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Ccl28Q9JIL2 130 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Trav4-2A0A075B638 110 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Bet1lO35153 111 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 CampP51437 172 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 GalnsQ571E4 520 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Rasl11aQ6IMB1 242 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Hist3h2bbQ8CGP0 126 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Hist3h2baQ9D2U9 126 aa9.14□□□□□ -0.95
Ciita-201ENSMUST00000023147 Trdv5A0A075B661 115 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms