RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ap5s1Q9D742 170 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Hivep2Q3UHF7 2430 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 1110002E22RikE0CYV9 1786 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Trav16A0A075B653 116 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Igkv6-23A0A140T8N5 115 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm12169F2Z474 250 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm10203F6QJ09 66 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gcm1P70348 436 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Isg15Q64339 161 aaKnown RBP9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Spred3Q6P6N5 408 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Slc37a1Q8R070 531 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Vmn1r70Q8R254 298 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr482Q8VG03 323 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tctex1d2Q9CQ66 144 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cldn23Q9D7D7 296 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Wdr90Q6ZPG2 1874 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Trav3n-3A0A0G2JEM0 114 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Trav23A0A0G2JG17 115 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Lnp1A0A1B0GSK3 178 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm28305F6U473 122 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cd81P35762 236 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 CebpdQ00322 268 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cypt1Q8CH20 168 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rab11fip5Q8R361 645 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Q8VC23 124 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr577Q8VH11 312 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Znhit3Q9CQK1 151 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Sh2d6Q9D413 297 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm14214V9GX35 225 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ttc28Q80XJ3 2450 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm12886B1AZM5 119 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Syngr2O55101 224 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 P01658 132 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Aadacl4Q8BM81 407 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr355Q8VFP6 310 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pear1Q8VIK5 1034 aa9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tet1Q3URK3 2007 aaKnown RBP9.03□□□□□ -0.96
Msh3-201ENSMUST00000022220 Abca12E9Q876 2595 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ccl2P10148 148 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 PpyP10601 100 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cox7a2P48771 83 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 Jsrp1Q3MI48 332 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tbr1Q64336 681 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm26558Q8BLW8 286 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 St6galnac6Q9JM95 333 aa9.02□□□□□ -0.96
Msh3-201ENSMUST00000022220 Igkv1-133A0A0B4J1H8 120 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Igkv4-50A0A0B4J1J0 117 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 D930048N14RikA2AA67 225 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm2381G3UY53 305 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 P01796 113 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 P01797 113 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 P01799 113 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Borcs7Q9CRC6 105 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Ube2v1Q9CZY3 147 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Tnfrsf13cQ9D8D0 175 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Dram1Q9DC58 238 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Dazap1Q9JII5 406 aaKnown RBP9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 1700031F05RikB1AX30 191 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Khdc1bP0C7A0 126 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 StradbQ8K4T3 418 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Mrps36Q9CQX8 102 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Rnase6Q9D244 153 aa9.02□□□□□ -0.97
Msh3-201ENSMUST00000022220 Igkv12-89A0A0G2JGW8 112 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm44501A8R0T9 150 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 MsmpB1AWI6 139 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm6096D3YTY6 151 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Defa6P50704 93 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Cd96Q3U0X8 602 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Fbxl7Q5BJ29 491 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Clec4b2Q67DU8 208 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Olfr303Q8VFP0 319 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Derl1Q99J56 251 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Ube2cQ9D1C1 179 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 MyadmO35682 320 aaKnown RBP9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Hoxa6P09092 232 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Olfr1535Q7TQU0 326 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 H2-M10.4Q85ZW8 331 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm10306Q9CUK2 115 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Zfp456B2RUK9 458 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm6034E9Q101 117 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Defa13P50711 93 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 B020031M17RikQ3UT11 173 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 P2ry6Q9ERK9 328 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Nubp1Q9R060 320 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gpr132Q9Z282 382 aa9.01□□□□□ -0.97
Msh3-201ENSMUST00000022220 Ms4a12A0A087WSB9 263 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm14124A2AU83 715 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Vmn1r119E9Q4H3 307 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Iglc3P01845 104 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Evi2aP20934 223 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gm16686Q3UMN9 131 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Tnfsf18Q7TS55 173 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 BsxQ810B3 232 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Spink6Q8BT20 105 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 ChtopQ9CY57 249 aaKnown RBP9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Wdr31Q9JHB4 367 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Lamtor2Q9JHS3 125 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 SelenokQ9JLJ1 94 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Trav4-2A0A075B638 110 aa9□□□□□ -0.97
Msh3-201ENSMUST00000022220 Trav13n-4A0A0G2JG01 110 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms