RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
CASC19-248ENST00000641674 UBE2L5PA0A1B0GUS4 154 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 SNCGO76070 127 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 NDUFC2O95298 119 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 NCR2O95944 276 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 TRGV3P03979 118 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 LGALS1P09382 135 aaKnown RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 P0C879 139 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 GP9P14770 177 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 CRIP2P52943 208 aaPredicted RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 RPL23P62829 140 aaKnown RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 GNB1P62873 340 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 RPL39P5Q59GN2 51 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 SPANXN5Q5MJ07 72 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 MORN3Q6PF18 240 aaPredicted RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 PDPNQ86YL7 162 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 RPP25LQ8N5L8 163 aaKnown RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 ZNF645Q8N7E2 425 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 GATAD1Q8WUU5 269 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 DLX4Q92988 240 aaPredicted RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 TXNDC17Q9BRA2 123 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 JPT2Q9H910 190 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 TECRQ9NZ01 308 aaKnown RBP4.3□□□□□ -1.72
CASC19-248ENST00000641674 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
CASC19-248ENST00000641674 H3BMG7 143 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 H3BUA1 57 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 SYS1-DBNDD2H3BUS1 97 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 FCN1O00602 326 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 NUPR1O60356 82 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 DPM2O94777 84 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 APOMO95445 188 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 IGHV3-11P01762 117 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 MT-ND6P03923 174 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 SLC25A5P05141 298 aaKnown RBP4.29□□□□□ -1.72
CASC19-248ENST00000641674 CRISP2P16562 243 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
CASC19-248ENST00000641674 OPRK1P41145 380 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 FXYD3Q14802 87 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 Q5XG85 94 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 SBSPONQ8IVN8 264 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 C1orf158Q8N1D5 194 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 MUC7Q8TAX7 377 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 C9orf85Q96MD7 179 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 COL7A1Q02388 2944 aa4.29□□□□□ -1.72
CASC19-248ENST00000641674 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 A0A087WW49 117 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 A0A087WWL8 130 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 UQCRQO14949 82 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 SERF1AO75920 110 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 ATP5G1P05496 136 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 C3orf79P0CE67 100 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 ATP5G3P48201 142 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 HERVK_113P63121 156 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 EIF4EBP1Q13541 118 aaPredicted RBP4.28□□□□□ -1.72
CASC19-248ENST00000641674 RTL8BQ17RB0 113 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 C9orf153Q5TBE3 101 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 ASPHD1Q5U4P2 390 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 TRPT1Q86TN4 253 aaKnown RBP4.28□□□□□ -1.72
CASC19-248ENST00000641674 BAGE3Q86Y29 109 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 USMG5Q96IX5 58 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 KCNS1Q96KK3 526 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 FAM103A1Q9BTL3 118 aaKnown RBP4.28□□□□□ -1.72
CASC19-248ENST00000641674 NPCDR1Q9BY65 106 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 SLC25A22Q9H936 323 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 KCNIP2Q9NS61 270 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 TNCP24821 2201 aa4.28□□□□□ -1.72
CASC19-248ENST00000641674 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 C15orf61A6NNL5 157 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 C11orf94C9JXX5 98 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 CHEK1O14757 476 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 DUSP14O95147 198 aaKnown RBP4.27□□□□□ -1.73
CASC19-248ENST00000641674 IGKV1-16P04430 117 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 MT3P25713 68 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 NMUP48645 174 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 TMEM258P61165 79 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 NDPQ00604 133 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 WFDC2Q14508 124 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 VMA21Q3ZAQ7 101 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 IBA57Q5T440 356 aaKnown RBP4.27□□□□□ -1.73
CASC19-248ENST00000641674 CASC10Q5T4H9 136 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 SPATA12Q7Z6I5 190 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 GTSCR1Q86UQ5 136 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 BPIFA4PQ86YQ2 179 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 C3orf22Q8N5N4 141 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 MRPL53Q96EL3 112 aaKnown RBP4.27□□□□□ -1.73
CASC19-248ENST00000641674 PRELID3AQ96N28 172 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
CASC19-248ENST00000641674 WDR83OSQ9Y284 106 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms