RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 A0A1W2PPQ1 181 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 SMIM27A0A1W2PRY6 76 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 SNURFLB1AK76 121 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 SPINK4O60575 86 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 ARMS2P0C7Q2 107 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 AZU1P20160 251 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 FAM3BP58499 235 aaPredicted RBP7.01□□□□□ -1.29
PHGDH-222ENST00000641587 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 Q8N1X5 172 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 TMEM263Q8WUH6 116 aaKnown RBP7.01□□□□□ -1.29
PHGDH-222ENST00000641587 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 IMMP2LQ96T52 175 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 GSN-AS1Q9NRJ2 163 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 MDFICQ9P1T7 246 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 PHLDA3Q9Y5J5 127 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 FAM231BA6NCW3 169 aa7□□□□□ -1.29
PHGDH-222ENST00000641587 M0R381 172 aa7□□□□□ -1.29
PHGDH-222ENST00000641587 IGLC6P0CF74 106 aa7□□□□□ -1.29
PHGDH-222ENST00000641587 MRPL54Q6P161 138 aaKnown RBP7□□□□□ -1.29
PHGDH-222ENST00000641587 NUP35Q8NFH5 326 aa7□□□□□ -1.29
PHGDH-222ENST00000641587 C16orf74Q96GX8 76 aa7□□□□□ -1.29
PHGDH-222ENST00000641587 BTF3L4Q96K17 158 aa7□□□□□ -1.29
PHGDH-222ENST00000641587 F2Z2F3 143 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 NUDT3O95989 172 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 RNASE3P12724 160 aaKnown RBP6.99□□□□□ -1.29
PHGDH-222ENST00000641587 CTRLP40313 264 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 DNLZQ5SXM8 178 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 SPANXN1Q5VSR9 72 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 ZNF493Q6ZR52 646 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 SPATA12Q7Z6I5 190 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 C15orf53Q8NAA6 179 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 SYT8Q8NBV8 401 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 OR10AG1Q8NH19 301 aa6.99□□□□□ -1.29
PHGDH-222ENST00000641587 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
PHGDH-222ENST00000641587 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 SNAI2O43623 268 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 OR5AL1P0C617 328 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 DEFB130BP0DP73 79 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 DEFB130AP0DP74 79 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 CACNG7P62955 275 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 RIGQ13278 110 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 TWIST1Q15672 202 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 ZFP82Q8N141 532 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-222ENST00000641587 C11orf72Q8NBR9 251 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 SPXQ9BT56 116 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 KRTAP1-5Q9BYS1 174 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 NOP10Q9NPE3 64 aaKnown RBP6.98□□□□□ -1.29
PHGDH-222ENST00000641587 MRPL16Q9NX20 251 aaKnown RBP6.98□□□□□ -1.29
PHGDH-222ENST00000641587 LINC00588Q9Y4M8 146 aa6.98□□□□□ -1.29
PHGDH-222ENST00000641587 TRGV1A0A0A0MS02 117 aa6.97□□□□□ -1.29
PHGDH-222ENST00000641587 F5H768 121 aa6.97□□□□□ -1.29
PHGDH-222ENST00000641587 M0R2P5 195 aa6.97□□□□□ -1.29
PHGDH-222ENST00000641587 CAMPP49913 170 aa6.97□□□□□ -1.29
PHGDH-222ENST00000641587 FOXA3P55318 350 aaPredicted RBP6.97□□□□□ -1.29
PHGDH-222ENST00000641587 RAB4BP61018 213 aa6.97□□□□□ -1.29
PHGDH-222ENST00000641587 ELOBQ15370 118 aa6.97□□□□□ -1.29
PHGDH-222ENST00000641587 PLAC8L1A1L4L8 177 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 S100A8P05109 93 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 NTF3P20783 257 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 HBBP68871 147 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 ZNF876PQ49A33 203 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 SMIM15Q7Z3B0 74 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 ATP5L2Q7Z4Y8 100 aa6.96□□□□□ -1.3
PHGDH-222ENST00000641587 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
PHGDH-222ENST00000641587 A0A1B0GW15 77 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 GAGE7O76087 117 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 TRGC1P0CF51 173 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 DAZ2Q13117 558 aaKnown RBP6.95□□□□□ -1.3
PHGDH-222ENST00000641587 DMRTA1Q5VZB9 504 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 AP1S3Q96PC3 154 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 MSRB1Q9NZV6 116 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
PHGDH-222ENST00000641587 TRBV24-1A0A075B6N3 115 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 TRGV2A0A075B6R0 118 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 LYRM9A8MSI8 78 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 NXPH4O95158 308 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 MGPP08493 103 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
PHGDH-222ENST00000641587 CCL18P55774 89 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 Q6ZTI0 123 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 YPEL4Q96NS1 127 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 CNFNQ9BYD5 112 aa6.94□□□□□ -1.3
PHGDH-222ENST00000641587 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 A0A087WWL8 130 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 A0A1B0GXF2 115 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 RPS10P46783 165 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms