RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 IFNA1P01562 189 aa9.35□□□□□ -0.91
PNKP-228ENST00000637325 RPL35P42766 123 aaKnown RBP9.35□□□□□ -0.91
PNKP-228ENST00000637325 RPL19P84098 196 aaKnown RBP9.35□□□□□ -0.91
PNKP-228ENST00000637325 UFSP1Q6NVU6 142 aa9.35□□□□□ -0.91
PNKP-228ENST00000637325 AKAP14Q86UN6 197 aa9.35□□□□□ -0.91
PNKP-228ENST00000637325 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
PNKP-228ENST00000637325 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
PNKP-228ENST00000637325 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
PNKP-228ENST00000637325 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
PNKP-228ENST00000637325 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
PNKP-228ENST00000637325 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
PNKP-228ENST00000637325 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
PNKP-228ENST00000637325 MLST8Q9BVC4 326 aa9.34□□□□□ -0.91
PNKP-228ENST00000637325 RYR1P21817 5038 aa9.33□□□□□ -0.92
PNKP-228ENST00000637325 CXCL1P09341 107 aa9.33□□□□□ -0.92
PNKP-228ENST00000637325 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
PNKP-228ENST00000637325 C11orf52Q96A22 123 aa9.33□□□□□ -0.92
PNKP-228ENST00000637325 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
PNKP-228ENST00000637325 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
PNKP-228ENST00000637325 PSCAO43653 123 aa9.32□□□□□ -0.92
PNKP-228ENST00000637325 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
PNKP-228ENST00000637325 CENPWQ5EE01 88 aa9.32□□□□□ -0.92
PNKP-228ENST00000637325 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
PNKP-228ENST00000637325 DERL1Q9BUN8 251 aa9.32□□□□□ -0.92
PNKP-228ENST00000637325 A0A087WWC5 75 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 PDE6DO43924 150 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 LINC00694P0DN24 101 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 SSTP61278 116 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 OR10AG1Q8NH19 301 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 Q9HAA7 133 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 Q9UF83 564 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 HSPG2P98160 4391 aa9.31□□□□□ -0.92
PNKP-228ENST00000637325 A0A087WTM6 91 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 RAB19A4D1S5 217 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 IBA57-AS1B1ANH7 110 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 CDK2AP2O75956 126 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 BCL2P10415 239 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 GNG4P50150 75 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
PNKP-228ENST00000637325 ZNF56Q15929 161 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 C9orf62Q8N4C0 152 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
PNKP-228ENST00000637325 VAX2Q9UIW0 290 aa9.3□□□□□ -0.92
PNKP-228ENST00000637325 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
PNKP-228ENST00000637325 SNAI2O43623 268 aa9.29□□□□□ -0.92
PNKP-228ENST00000637325 OR5AL1P0C617 328 aa9.29□□□□□ -0.92
PNKP-228ENST00000637325 SMIM17P0DL12 118 aa9.29□□□□□ -0.92
PNKP-228ENST00000637325 TAGLN2P37802 199 aaKnown RBP9.29□□□□□ -0.92
PNKP-228ENST00000637325 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
PNKP-228ENST00000637325 RAB4BP61018 213 aa9.29□□□□□ -0.92
PNKP-228ENST00000637325 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
PNKP-228ENST00000637325 BIN3Q9NQY0 253 aa9.29□□□□□ -0.92
PNKP-228ENST00000637325 F5H697 171 aa9.28□□□□□ -0.92
PNKP-228ENST00000637325 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
PNKP-228ENST00000637325 OR2D3Q8NGH3 330 aa9.28□□□□□ -0.92
PNKP-228ENST00000637325 SMIM12Q96EX1 92 aa9.28□□□□□ -0.92
PNKP-228ENST00000637325 TPPP3Q9BW30 176 aa9.28□□□□□ -0.92
PNKP-228ENST00000637325 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
PNKP-228ENST00000637325 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 XKRY2A2RUG3 117 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 P01737 135 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 TOR2AQ5JU69 321 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.27□□□□□ -0.93
PNKP-228ENST00000637325 TM2D2Q9BX73 214 aa9.27□□□□□ -0.93
PNKP-228ENST00000637325 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
PNKP-228ENST00000637325 IGLV2-8P01709 118 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 GZMBP10144 247 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 BLOC1S1P78537 153 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 LAGE3Q14657 143 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 ALKAL2Q6UX46 152 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 AP1S3Q96PC3 154 aa9.26□□□□□ -0.93
PNKP-228ENST00000637325 TRAV8-3A0A0A6YYJ7 113 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 C19orf71A6NCJ1 209 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 RBFOX3A6NFN3 312 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 UBE2D3P61077 147 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 UBE2D2P62837 147 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 CACNG7P62955 275 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 DAZ4Q86SG3 579 aaKnown RBP9.25□□□□□ -0.93
PNKP-228ENST00000637325 Q8N3U1 123 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 MAPKAPK5-AS1Q8N8E1 139 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
PNKP-228ENST00000637325 DAZ3Q9NR90 486 aaKnown RBP9.25□□□□□ -0.93
PNKP-228ENST00000637325 NEXN-AS1Q8NBZ9 246 aa9.24□□□□□ -0.93
PNKP-228ENST00000637325 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
PNKP-228ENST00000637325 TRBV20OR9-2A0A075B6H5 130 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 A0A087WX48 190 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 TMEM262E9PQX1 116 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 MGPP08493 103 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 IGLC6P0CF74 106 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 NIT1Q86X76 327 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 PCLOQ9Y6V0 5065 aa9.23□□□□□ -0.93
PNKP-228ENST00000637325 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
PNKP-228ENST00000637325 F2Z2F3 143 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms