RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 TMEM258P61165 79 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 ZFP2Q6ZN57 461 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 TRBV20-1A0A075B6N2 111 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.43□□□□□ -0.42
CLN5-208ENST00000636183 PCNX2A6NKB5 2137 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 DAND5Q8N907 189 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 CCL25O15444 150 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 IGHG2P01859 326 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 TSC2P49815 1807 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
CLN5-208ENST00000636183 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
CLN5-208ENST00000636183 K7ERJ3 54 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 PRO0255Q9UI72 69 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 MAJINQ3KP22 176 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 FAM19A5Q7Z5A7 132 aaPredicted RBP12.41□□□□□ -0.42
CLN5-208ENST00000636183 CEND1Q8N111 149 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 RETNQ9HD89 108 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 FOXI1Q12951 378 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 TMEM61Q8N0U2 210 aa12.41□□□□□ -0.42
CLN5-208ENST00000636183 OPRPNQ99935 248 aaPredicted RBP12.41□□□□□ -0.42
CLN5-208ENST00000636183 FAM222AQ5U5X8 452 aa12.4□□□□□ -0.42
CLN5-208ENST00000636183 SPINK6Q6UWN8 80 aa12.4□□□□□ -0.42
CLN5-208ENST00000636183 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
CLN5-208ENST00000636183 ZNF524Q96C55 264 aa12.4□□□□□ -0.42
CLN5-208ENST00000636183 MUC6Q6W4X9 2439 aa12.4□□□□□ -0.42
CLN5-208ENST00000636183 C11orf53Q8IXP5 236 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 DOCK11Q5JSL3 2073 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 LRRC75A-AS1Q8N1F1 130 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 ANKRD29Q8N6D5 301 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 PLXNA3P51805 1871 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 DIRC1Q969H9 104 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 COLCA2A8K830 154 aa12.39□□□□□ -0.43
CLN5-208ENST00000636183 MAP6D1Q9H9H5 199 aa12.38□□□□□ -0.43
CLN5-208ENST00000636183 TEX22C9J3V5 150 aa12.38□□□□□ -0.43
CLN5-208ENST00000636183 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
CLN5-208ENST00000636183 V9GYV3 84 aa12.38□□□□□ -0.43
CLN5-208ENST00000636183 IGLV11-55A0A075B6I3 123 aa12.38□□□□□ -0.43
CLN5-208ENST00000636183 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
CLN5-208ENST00000636183 EML6Q6ZMW3 1958 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 PLXNA4Q9HCM2 1894 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 FAM231DQ6ZW35 169 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 ZNF664Q8N3J9 261 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 Q8N7P7 452 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 HIVEP2P31629 2446 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 ACYP1P07311 99 aa12.37□□□□□ -0.43
CLN5-208ENST00000636183 I3L2K1 104 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 ADAMTS9Q9P2N4 1935 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 HEATR5AQ86XA9 2040 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 K7EIM0 57 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 ZNF726P1Q15940 193 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
CLN5-208ENST00000636183 LENEPQ9Y5L5 61 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 LGALS9BQ3B8N2 356 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 LGALS9CQ6DKI2 356 aa12.36□□□□□ -0.43
CLN5-208ENST00000636183 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
CLN5-208ENST00000636183 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
CLN5-208ENST00000636183 Q8NA96 180 aa12.35□□□□□ -0.43
CLN5-208ENST00000636183 OTOGLQ3ZCN5 2332 aa12.35□□□□□ -0.43
CLN5-208ENST00000636183 A6NDX4 124 aa12.35□□□□□ -0.43
CLN5-208ENST00000636183 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
CLN5-208ENST00000636183 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
CLN5-208ENST00000636183 RPL39P62891 51 aaKnown RBP12.34□□□□□ -0.43
CLN5-208ENST00000636183 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
CLN5-208ENST00000636183 FGF23Q9GZV9 251 aaPredicted RBP12.34□□□□□ -0.43
CLN5-208ENST00000636183 SIRPDQ9H106 197 aa12.34□□□□□ -0.43
CLN5-208ENST00000636183 PLA2G2AP14555 144 aa12.34□□□□□ -0.43
CLN5-208ENST00000636183 UNQ9165/PRO28630Q6UXU0 137 aa12.34□□□□□ -0.43
CLN5-208ENST00000636183 MED13Q9UHV7 2174 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 C9JQL5 133 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 K7EMT4 169 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 IGLC2P0DOY2 106 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 C11orf52Q96A22 123 aa12.33□□□□□ -0.44
CLN5-208ENST00000636183 ODF1Q14990 250 aa12.32□□□□□ -0.44
CLN5-208ENST00000636183 DENND4AQ7Z401 1863 aa12.32□□□□□ -0.44
CLN5-208ENST00000636183 Q6YL49 198 aa12.32□□□□□ -0.44
CLN5-208ENST00000636183 SMR3AQ99954 134 aa12.32□□□□□ -0.44
CLN5-208ENST00000636183 MRPL52Q86TS9 123 aaKnown RBP12.32□□□□□ -0.44
CLN5-208ENST00000636183 MDFICQ9P1T7 246 aa12.32□□□□□ -0.44
CLN5-208ENST00000636183 NUPR2A6NF83 97 aa12.32□□□□□ -0.44
CLN5-208ENST00000636183 TRAV10A0A0B4J240 114 aa12.31□□□□□ -0.44
CLN5-208ENST00000636183 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
CLN5-208ENST00000636183 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
CLN5-208ENST00000636183 CFC1P0CG37 223 aa12.31□□□□□ -0.44
CLN5-208ENST00000636183 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
CLN5-208ENST00000636183 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
CLN5-208ENST00000636183 REG3AQ06141 175 aa12.31□□□□□ -0.44
CLN5-208ENST00000636183 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
CLN5-208ENST00000636183 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
CLN5-208ENST00000636183 H3BMG7 143 aa12.3□□□□□ -0.44
CLN5-208ENST00000636183 CXCL5P42830 114 aa12.3□□□□□ -0.44
CLN5-208ENST00000636183 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
CLN5-208ENST00000636183 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
CLN5-208ENST00000636183 MUSTN1Q8IVN3 82 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms