RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 Q6ZSN1 163 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 SFRP2Q96HF1 295 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 MLST8Q9BVC4 326 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
CLN6-210ENST00000635747 JPT2Q9H910 190 aa12.35□□□□□ -0.43
CLN6-210ENST00000635747 PCLOQ9Y6V0 5065 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 A0A087WWC5 75 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 GAGE12JA6NER3 117 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 M0R381 172 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 TAGLN2P37802 199 aaKnown RBP12.34□□□□□ -0.43
CLN6-210ENST00000635747 GAGE1Q13065 139 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 GAGE4Q13068 117 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 GAGE5Q13069 117 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 GAGE13Q4V321 117 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 CDPF1Q6NVV7 123 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 GNG13Q9P2W3 67 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 HSPG2P98160 4391 aa12.34□□□□□ -0.43
CLN6-210ENST00000635747 IBA57-AS1B1ANH7 110 aa12.33□□□□□ -0.44
CLN6-210ENST00000635747 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
CLN6-210ENST00000635747 A0A087WTM6 91 aa12.32□□□□□ -0.44
CLN6-210ENST00000635747 IFNA1P01562 189 aa12.32□□□□□ -0.44
CLN6-210ENST00000635747 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
CLN6-210ENST00000635747 RPL35P42766 123 aaKnown RBP12.32□□□□□ -0.44
CLN6-210ENST00000635747 C14orf178Q8N769 122 aaPredicted RBP12.32□□□□□ -0.44
CLN6-210ENST00000635747 C11orf52Q96A22 123 aa12.32□□□□□ -0.44
CLN6-210ENST00000635747 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
CLN6-210ENST00000635747 PSCAO43653 123 aa12.31□□□□□ -0.44
CLN6-210ENST00000635747 CCL20P78556 96 aa12.31□□□□□ -0.44
CLN6-210ENST00000635747 A0A087WWL8 130 aa12.3□□□□□ -0.44
CLN6-210ENST00000635747 LAGE3Q14657 143 aa12.3□□□□□ -0.44
CLN6-210ENST00000635747 PDE6DO43924 150 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 IGHV3-30P01768 117 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 IGHV3-33P01772 117 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 IGHV3-30-3P0DP02 117 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 IGHV3-30-5P0DP03 117 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 PRR27Q6MZM9 219 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 SMIM12Q96EX1 92 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
CLN6-210ENST00000635747 KRTAP17-1Q9BYP8 105 aa12.29□□□□□ -0.44
CLN6-210ENST00000635747 SNAI2O43623 268 aa12.28□□□□□ -0.44
CLN6-210ENST00000635747 OR5AL1P0C617 328 aa12.28□□□□□ -0.44
CLN6-210ENST00000635747 BCL2P10415 239 aa12.28□□□□□ -0.44
CLN6-210ENST00000635747 RPL36AP83881 106 aaKnown RBP12.28□□□□□ -0.44
CLN6-210ENST00000635747 RPL19P84098 196 aaKnown RBP12.28□□□□□ -0.44
CLN6-210ENST00000635747 RPL36ALQ969Q0 106 aaKnown RBP12.28□□□□□ -0.44
CLN6-210ENST00000635747 DAZAP1Q96EP5 407 aaKnown RBP12.28□□□□□ -0.44
CLN6-210ENST00000635747 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
CLN6-210ENST00000635747 NDUFS6O75380 124 aaKnown RBP12.27□□□□□ -0.45
CLN6-210ENST00000635747 RAB4BP61018 213 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 RAB14P61106 215 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 IFITM2Q01629 132 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 MEF2BQ02080 365 aaPredicted RBP12.27□□□□□ -0.45
CLN6-210ENST00000635747 TOR2AQ5JU69 321 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 SPANXN1Q5VSR9 72 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 TM2D2Q9BX73 214 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 Q9UF83 564 aa12.27□□□□□ -0.45
CLN6-210ENST00000635747 APOBP04114 4563 aaKnown RBP12.26□□□□□ -0.45
CLN6-210ENST00000635747 MAPKAPK5-AS1Q8N8E1 139 aa12.26□□□□□ -0.45
CLN6-210ENST00000635747 OR10AG1Q8NH19 301 aa12.26□□□□□ -0.45
CLN6-210ENST00000635747 DERL1Q9BUN8 251 aa12.26□□□□□ -0.45
CLN6-210ENST00000635747 Q9HAA7 133 aa12.26□□□□□ -0.45
CLN6-210ENST00000635747 VAX2Q9UIW0 290 aa12.26□□□□□ -0.45
CLN6-210ENST00000635747 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
CLN6-210ENST00000635747 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
CLN6-210ENST00000635747 GNG4P50150 75 aa12.25□□□□□ -0.45
CLN6-210ENST00000635747 RPS20P60866 119 aaKnown RBP12.25□□□□□ -0.45
CLN6-210ENST00000635747 CENPWQ5EE01 88 aa12.25□□□□□ -0.45
CLN6-210ENST00000635747 BIN3Q9NQY0 253 aa12.25□□□□□ -0.45
CLN6-210ENST00000635747 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
CLN6-210ENST00000635747 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
CLN6-210ENST00000635747 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
CLN6-210ENST00000635747 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
CLN6-210ENST00000635747 MED9Q9NWA0 146 aa12.24□□□□□ -0.45
CLN6-210ENST00000635747 XKRY2A2RUG3 117 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 SMIM17P0DL12 118 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 UBE2D3P61077 147 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 UBE2D2P62837 147 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 ZNF56Q15929 161 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 FAM210AQ96ND0 272 aa12.23□□□□□ -0.45
CLN6-210ENST00000635747 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
CLN6-210ENST00000635747 IGLV2-8P01709 118 aa12.22□□□□□ -0.45
CLN6-210ENST00000635747 KCNIP4Q6PIL6 250 aa12.22□□□□□ -0.45
CLN6-210ENST00000635747 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
CLN6-210ENST00000635747 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
CLN6-210ENST00000635747 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
CLN6-210ENST00000635747 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 F5H697 171 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 TMEM250H0YL14 139 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 ELOBQ15370 118 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
CLN6-210ENST00000635747 Q8N1X5 172 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 OR2D3Q8NGH3 330 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 AP1S3Q96PC3 154 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
CLN6-210ENST00000635747 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
CLN6-210ENST00000635747 A0A087WX48 190 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 C19orf71A6NCJ1 209 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 F2Z2F3 143 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms