RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 BUB3O43684 328 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 OPRPNQ99935 248 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-211ENST00000635193 LOXL1Q08397 574 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-211ENST00000635193 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 LECT2O14960 151 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL11A1-211ENST00000635193 PLA2G5P39877 138 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 TRBV6-1A0A0K0K1D8 114 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 PRAC2D3DTV9 90 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 E7EUB6 86 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 P0C879 139 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 XCL1P47992 114 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 MAPK1IP1LQ8NDC0 245 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 FAM208BQ5VWN6 2430 aa9.02□□□□□ -0.96
COL11A1-211ENST00000635193 U3KQE9 123 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 TEX22C9J3V5 150 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 ELANEP08246 267 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 MP68P56378 58 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 MALRD1Q5VYJ5 2156 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 TEX49A0A1B0GTD5 131 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 IGLC6P0CF74 106 aa9.02□□□□□ -0.97
COL11A1-211ENST00000635193 PSCAO43653 123 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 CENPVL3A0A0U1RRI6 287 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 IGLV2-8P01709 118 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 ANGP03950 147 aaKnown RBP9.01□□□□□ -0.97
COL11A1-211ENST00000635193 UBE2DNLQ8IWF7 75 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 GDF5OSQ5U4N7 250 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 C5orf38Q86SI9 138 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 VSIG2Q96IQ7 327 aa9.01□□□□□ -0.97
COL11A1-211ENST00000635193 NUP210Q8TEM1 1887 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-211ENST00000635193 CACNA1AO00555 2505 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 NREPQ16612 68 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 C16orf54Q6UWD8 224 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 ZNF295-AS1Q8N0V1 137 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 SPATA25Q9BR10 227 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 TP53TG3Q9ULZ0 132 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 PLA2G2CQ5R387 149 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 FAM236DA0A1B0GTK5 79 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 OBSL1O75147 1896 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 FAM236CP0DP71 79 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 Q6ZPA2 131 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
COL11A1-211ENST00000635193 A0A096LPF7 62 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 C20orf197Q8N268 126 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 HIST2H2BCQ6DN03 193 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
COL11A1-211ENST00000635193 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
COL11A1-211ENST00000635193 C14orf132Q9NPU4 83 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 V9GYY9 64 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 ARHGAP21Q5T5U3 1957 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 H3BQ85 93 aa8.99□□□□□ -0.97
COL11A1-211ENST00000635193 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 IGHV4-28A0A0C4DH34 117 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 PIEZO1Q92508 2521 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 ACACBO00763 2458 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 NDUFS5O43920 106 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 DKK4Q9UBT3 224 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 LINC00322Q6ZN03 302 aaPredicted RBP8.98□□□□□ -0.97
COL11A1-211ENST00000635193 MED13Q9UHV7 2174 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 IGKV1D-37A0A075B6S9 117 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 J3QLI3 93 aa8.98□□□□□ -0.97
COL11A1-211ENST00000635193 A0A0U1RQV1 116 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 Q9HAA7 133 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL11A1-211ENST00000635193 GTF3C1Q12789 2109 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 SP5Q6BEB4 398 aaPredicted RBP8.97□□□□□ -0.97
COL11A1-211ENST00000635193 AJUBAQ96IF1 538 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 CRIP3Q6Q6R5 217 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 BRWD1-AS2P59051 145 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 SDIM1Q6ZPB5 146 aa8.97□□□□□ -0.97
COL11A1-211ENST00000635193 NDUFA7O95182 113 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 MED14OSP0DP75 135 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 Q8N9W7 124 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 PTPRQQ9UMZ3 2332 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 TRBV12-3P01733 135 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 IGHV3-30-3P0DP02 117 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 MIAQ16674 131 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 IGFL2Q6UWQ7 119 aa8.96□□□□□ -0.97
COL11A1-211ENST00000635193 IGLV1-47P01700 117 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 UPK3BQ9BT76 320 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 NCKAP5O14513 1909 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 MED13LQ71F56 2210 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 PCNX2A6NKB5 2137 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 MPLKIPQ8TAP9 179 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 TMEM256-PLSCR3K7ERE1 68 aa8.96□□□□□ -0.98
COL11A1-211ENST00000635193 GRNP28799 593 aaKnown RBP8.96□□□□□ -0.98
COL11A1-211ENST00000635193 CLPSL1A2RUU4 121 aa8.95□□□□□ -0.98
COL11A1-211ENST00000635193 PLCE1Q9P212 2302 aa8.95□□□□□ -0.98
COL11A1-211ENST00000635193 FAM240AA0A1B0GVK7 77 aa8.95□□□□□ -0.98
COL11A1-211ENST00000635193 CCDC179H3BU77 68 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms