RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LRCOL1A6NCL2 159 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 ZNF98A6NK75 572 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 H3BRN7 92 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 M0R2Z0 102 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 NDUFS6O75380 124 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 TNFAIP8O95379 198 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 IFNA21P01568 189 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 IFNA17P01571 189 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 IGKV2D-28P01615 120 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 RLN2P04090 185 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 ATP5G1P05496 136 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 OR5AC1P0C628 307 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 RD3LP0DJH9 198 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 CXCL2P19875 107 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 CXCL3P19876 107 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 SNCAP37840 140 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 ATP5G3P48201 142 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 AKR1C2P52895 323 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 EMP1P54849 157 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 FXYD7P58549 80 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 DAD1P61803 113 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 NCS1P62166 190 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 SSBP1Q04837 148 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 BAXQ07812 192 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 ESRGQ1W209 222 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 SPINK13Q1W4C9 94 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 RRN3P1Q2M238 152 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 SP6Q3SY56 376 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 FAM231DQ6ZW35 169 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 SSX7Q7RTT5 188 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 PRNTQ86SH4 94 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 UBE2DNLQ8IWF7 75 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM229BQ8NBD8 167 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 ZNF738Q8NE65 137 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 OR4C16Q8NGL9 310 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 TERB2Q8NHR7 220 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 DTD1Q8TEA8 209 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM263Q8WUH6 116 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 BLNKQ8WV28 456 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 SMIM4Q8WVI0 70 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 S100A16Q96FQ6 103 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 ODF3Q96PU9 254 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM70Q9BUB7 260 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 MIXL1Q9H2W2 232 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 NAA60Q9H7X0 242 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 URGCP-MRPS24S4R325 110 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 LPAP08519 4548 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 TRAV12-2A0A075B6T6 113 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 A0A087WTM6 91 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 LOC389332A0A1B0GUA5 103 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 A0A1B0GXF2 115 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 DUXBA0A1W2PPF3 345 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 C7orf66A4D0T2 115 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 RBFOX3A6NFN3 312 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 C9JQL5 133 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 GABARAPH6UMI1 98 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 M0QXV9 152 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SLC17A3O00476 420 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 OR7C2O60412 319 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 HPGDSO60760 199 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 ATG12O94817 140 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 ATP6V1G2O95670 118 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 C1QBP02746 253 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 MT1HL1P0DM35 61 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SULT1A3P0DMM9 295 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SULT1A4P0DMN0 295 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 INAFM2P0DMQ5 153 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 IGLC2P0DOY2 106 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SLC25A6P12236 298 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 HTN3P15516 51 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 M6PRP20645 277 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 NTF3P20783 257 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 S100GP29377 79 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 FUSP35637 526 aaKnown RBP eCLIP1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 CCL18P55774 89 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 B2MP61769 119 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 BTN1A1Q13410 526 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SMCO1Q147U7 214 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 NEDD8Q15843 81 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 RNASE10Q5GAN6 216 aaKnown RBP1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 FAM104BQ5XKR9 115 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 PATE2Q6UY27 113 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SNX29P2Q8IUI4 249 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 IQCF2Q8IXL9 164 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 RNF182Q8N6D2 247 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 ST20-AS1Q8NBB2 130 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 OR8A1Q8NGG7 326 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 Q8WTZ3 238 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 ACY3Q96HD9 319 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 GPR82Q96P67 336 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 LINC00467Q9BRT7 94 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 MARVELD1Q9BSK0 173 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SHANK2-AS3Q9BTD1 123 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 VCX3BQ9H321 246 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 SND1-IT1Q9HBX3 110 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 RPRMQ9NS64 109 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 CACFD1Q9UGQ2 172 aa1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 TIMM8BQ9Y5J9 83 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-208ENST00000634926 U3KQ87 197 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms