RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 RPS21P63220 83 aaKnown RBP2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 SDIM1Q6ZPB5 146 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 POM121L12Q8N7R1 296 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 INTS1Q8N201 2190 aaKnown RBP2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 KNTC1P50748 2209 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 UNC13CQ8NB66 2214 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 TRAV13-2A0A0B4J235 113 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 C1orf229Q6ZS94 237 aaPredicted RBP2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 ZNF524Q96C55 264 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 DKK2Q9UBU2 259 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 PI4KAP42356 2102 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 TRAV21A0A0B4J279 112 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 D6R8Y8 96 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 PRSS2P07478 247 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 P0C879 139 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 Q6ZPA2 131 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 MUSTN1Q8IVN3 82 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 PRSS33Q8NF86 280 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 FLVCR1-AS1Q8TAF5 88 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 ITLN1Q8WWA0 313 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 ITLN2Q8WWU7 325 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 FAM168AQ92567 244 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 TTTY13Q9BZ97 58 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 DOCK10Q96BY6 2186 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 PRKDCP78527 4128 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 TRAV3A0A0B4J244 114 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 WISP2O76076 250 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 ZNF22P17026 224 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 HOXA4Q00056 320 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 LINC01554Q52M75 96 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 DYNAPQ8N1N2 210 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 ARRDC1-AS1Q9H2J1 176 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 ZNF492Q9P255 531 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 PCDH15Q96QU1 1955 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 Q8N8P6 123 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 OPRPNQ99935 248 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 PHLDA3Q9Y5J5 127 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 TENM4Q6N022 2769 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 CPAMD8Q8IZJ3 1885 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 AGRNO00468 2067 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 TRBV7-1A0A0A6YYK4 115 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 A6NED7 52 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 CLPSP04118 112 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 IGHV4-34P06331 123 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 CFC1BP0CG36 223 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 CFC1P0CG37 223 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 FHL2Q14192 279 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 FP248Q71RG6 208 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 MIR17HGQ75NE6 70 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 TET1Q8NFU7 2136 aa2.95□□□□□ -1.94
R3HDM1-220ENST00000628915 ADAMTS9Q9P2N4 1935 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 TRAV23DV6A0A075B6W5 121 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 A0A1B0GUT8 65 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 MRPL51Q4U2R6 128 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 FAM27BQ5VT28 67 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 LINC00269Q8N2A0 174 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 C8orf49Q96NF6 230 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 SCGB3A1Q96QR1 104 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 SNURFQ9Y675 71 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 URB1O60287 2271 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 PTPRQQ9UMZ3 2332 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 ARHGAP21Q5T5U3 1957 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 Q6ZR03 302 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 RETNLBQ9BQ08 111 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 APC2O95996 2303 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 FREM1Q5H8C1 2179 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 NDUFA3O95167 84 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 IGKV3-11P04433 115 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 COL8A2P25067 703 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 PLA2G5P39877 138 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 MAP6D1Q9H9H5 199 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 DEC1Q9P2X7 70 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 WNK1Q9H4A3 2382 aa2.94□□□□□ -1.94
R3HDM1-220ENST00000628915 NCOA6Q14686 2063 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 TRGV8A0A0C4DH27 118 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 IGLV2-14P01704 120 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 TIMM21Q9BVV7 248 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 PTPRZ1P23471 2315 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 OTOGLQ3ZCN5 2332 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 CADP27708 2225 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 SH2D1AO60880 128 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 LINC00313P59037 77 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 GPHB5Q86YW7 130 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 NDUFA12Q9UI09 145 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 CCL26Q9Y258 94 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 DOPEY2Q9Y3R5 2298 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 RP1P56715 2156 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 A0A0J9YXV3 536 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 TRBV12-3P01733 135 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 CD59P13987 128 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 UBE2D3P61077 147 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 UBE2D2P62837 147 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 SPINK9Q5DT21 86 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 SPANXN1Q5VSR9 72 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 SDK1Q7Z5N4 2213 aa2.93□□□□□ -1.94
R3HDM1-220ENST00000628915 TNRC6BQ9UPQ9 1833 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-220ENST00000628915 LEPROTO15243 131 aa2.92□□□□□ -1.94
R3HDM1-220ENST00000628915 ATP11AUNQ6ZP68 121 aa2.92□□□□□ -1.94
R3HDM1-220ENST00000628915 Q8IYB0 196 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms