RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 DENND4CQ5VZ89 1909 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 IGHG2P01859 326 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 SIRPDQ9H106 197 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 KMT2EQ8IZD2 1858 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 IGLV2-14P01704 120 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 MYCNOSP40205 109 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 HHLA3Q9XRX5 114 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 NUPR1O60356 82 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 RPL39P62891 51 aaKnown RBP9.86□□□□□ -0.83
SCN8A-209ENST00000627620 MSMPQ1L6U9 139 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 COX7B2Q8TF08 81 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
SCN8A-209ENST00000627620 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 TIRAPP58753 221 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 DEFB1P60022 68 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 MUSTN1Q8IVN3 82 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 C4orf3Q8WVX3 66 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 MUC6Q6W4X9 2439 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 BDP1A6H8Y1 2624 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 F8W735 103 aaPredicted RBP9.85□□□□□ -0.83
SCN8A-209ENST00000627620 CDPF1Q6NVV7 123 aa9.85□□□□□ -0.83
SCN8A-209ENST00000627620 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 COA6Q5JTJ3 125 aaKnown RBP9.84□□□□□ -0.83
SCN8A-209ENST00000627620 DEFB135Q30KP9 77 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 ANKRD39Q53RE8 183 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 LINC01545Q5VT33 79 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 Q6ZVH6 145 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 PTPRQQ9UMZ3 2332 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 DEFB4AO15263 64 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 TRACP01848 142 aa9.84□□□□□ -0.83
SCN8A-209ENST00000627620 CITED2Q99967 270 aaPredicted RBP9.83□□□□□ -0.84
SCN8A-209ENST00000627620 PLCE1Q9P212 2302 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 FBXL19-AS1Q494R0 122 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 Q8NA96 180 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 NCKAP5O14513 1909 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 CLPSL1A2RUU4 121 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 A4D1N5 150 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 UNQ9165/PRO28630Q6UXU0 137 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 DEFB125Q8N687 156 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 IGLL5B9A064 214 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
SCN8A-209ENST00000627620 KIR2DL5BA0A0G2JN68 375 aa9.82□□□□□ -0.84
SCN8A-209ENST00000627620 KIR2DL5BA0A0G2JPC4 375 aa9.82□□□□□ -0.84
SCN8A-209ENST00000627620 FUSP35637 526 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCN8A-209ENST00000627620 KIR2DL5AQ8N109 375 aa9.82□□□□□ -0.84
SCN8A-209ENST00000627620 H0YGX0 51 aa9.82□□□□□ -0.84
SCN8A-209ENST00000627620 MED14OSP0DP75 135 aa9.82□□□□□ -0.84
SCN8A-209ENST00000627620 DAND5Q8N907 189 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 A6NDX4 124 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 NDUFA1O15239 70 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 FANCD2OSQ96PS1 177 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 OPRPNQ99935 248 aaPredicted RBP9.81□□□□□ -0.84
SCN8A-209ENST00000627620 CTRLP40313 264 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 TMEM61Q8N0U2 210 aa9.81□□□□□ -0.84
SCN8A-209ENST00000627620 IGHV4-28A0A0C4DH34 117 aa9.8□□□□□ -0.84
SCN8A-209ENST00000627620 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
SCN8A-209ENST00000627620 MDFICQ9P1T7 246 aa9.8□□□□□ -0.84
SCN8A-209ENST00000627620 TTC28Q96AY4 2481 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 SMAD5-AS1Q9Y6J3 95 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 A0A0J9YX75 114 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 NCR3O14931 201 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 TDRG1Q3Y452 100 aa9.79□□□□□ -0.84
SCN8A-209ENST00000627620 ACYP1P07311 99 aa9.78□□□□□ -0.84
SCN8A-209ENST00000627620 KLK12Q9UKR0 248 aa9.78□□□□□ -0.84
SCN8A-209ENST00000627620 KIF26AQ9ULI4 1882 aaPredicted RBP9.78□□□□□ -0.84
SCN8A-209ENST00000627620 DNAJC9-AS1A6NH13 148 aa9.78□□□□□ -0.84
SCN8A-209ENST00000627620 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
SCN8A-209ENST00000627620 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.84
SCN8A-209ENST00000627620 PLXNB3Q9ULL4 1909 aa9.77□□□□□ -0.84
SCN8A-209ENST00000627620 TNFRSF13BO14836 293 aaPredicted RBP9.77□□□□□ -0.85
SCN8A-209ENST00000627620 FXYD2P54710 66 aa9.77□□□□□ -0.85
SCN8A-209ENST00000627620 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
SCN8A-209ENST00000627620 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.85
SCN8A-209ENST00000627620 E9PLD3 99 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 INSL3P51460 131 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 LMO4P61968 165 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 LOXL1Q08397 574 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-209ENST00000627620 CCDC140Q96MF4 163 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 IGKV1D-37A0A075B6S9 117 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 FRMD6-AS1P0C7T7 363 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 CXCL5P42830 114 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 UBE2AP49459 152 aa9.76□□□□□ -0.85
SCN8A-209ENST00000627620 PROP1O75360 226 aa9.75□□□□□ -0.85
SCN8A-209ENST00000627620 ODF3BA8MYP8 253 aa9.75□□□□□ -0.85
SCN8A-209ENST00000627620 CHD3Q12873 2000 aaKnown RBP9.75□□□□□ -0.85
SCN8A-209ENST00000627620 C19orf71A6NCJ1 209 aa9.75□□□□□ -0.85
SCN8A-209ENST00000627620 LINC01548A6NM66 108 aa9.75□□□□□ -0.85
SCN8A-209ENST00000627620 PRO0255Q9UI72 69 aa9.75□□□□□ -0.85
SCN8A-209ENST00000627620 RBM3P98179 157 aaKnown RBP9.75□□□□□ -0.85
SCN8A-209ENST00000627620 LINC01620Q4KN68 170 aa9.75□□□□□ -0.85
SCN8A-209ENST00000627620 NOTCH2Q04721 2471 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms