RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 CRYGDP07320 174 aa15.16■□□□□ 0.02
SF1-220ENST00000626028 CENPWQ5EE01 88 aa15.16■□□□□ 0.02
SF1-220ENST00000626028 BIN3Q9NQY0 253 aa15.16■□□□□ 0.02
SF1-220ENST00000626028 A0A087WWC5 75 aa15.15■□□□□ 0.02
SF1-220ENST00000626028 TRBV10-1A0A0K0K1A3 114 aa15.15■□□□□ 0.02
SF1-220ENST00000626028 GNG4P50150 75 aa15.15■□□□□ 0.02
SF1-220ENST00000626028 PRR27Q6MZM9 219 aa15.15■□□□□ 0.02
SF1-220ENST00000626028 RPS20P60866 119 aaKnown RBP15.14■□□□□ 0.01
SF1-220ENST00000626028 BLOC1S1P78537 153 aa15.14■□□□□ 0.01
SF1-220ENST00000626028 RPL19P84098 196 aaKnown RBP15.14■□□□□ 0.01
SF1-220ENST00000626028 OR10J3Q5JRS4 329 aa15.14■□□□□ 0.01
SF1-220ENST00000626028 FAM74A4Q5TZK3 123 aa15.14■□□□□ 0.01
SF1-220ENST00000626028 C16orf90A8MZG2 172 aa15.13■□□□□ 0.01
SF1-220ENST00000626028 IGLV2-8P01709 118 aa15.13■□□□□ 0.01
SF1-220ENST00000626028 DAZAP1Q96EP5 407 aaKnown RBP15.13■□□□□ 0.01
SF1-220ENST00000626028 MED9Q9NWA0 146 aa15.13■□□□□ 0.01
SF1-220ENST00000626028 A0A087WWL8 130 aa15.12■□□□□ 0.01
SF1-220ENST00000626028 RAB4BP61018 213 aa15.12■□□□□ 0.01
SF1-220ENST00000626028 C14orf178Q8N769 122 aaPredicted RBP15.12■□□□□ 0.01
SF1-220ENST00000626028 XKRY2A2RUG3 117 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 C19orf71A6NCJ1 209 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 GAGE12JA6NER3 117 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 EREGO14944 169 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 ERVFC1-1P60608 527 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 GAGE1Q13065 139 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 GAGE4Q13068 117 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 GAGE5Q13069 117 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 GAGE13Q4V321 117 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 OR10AG1Q8NH19 301 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 LYPD6BQ8NI32 183 aa15.11■□□□□ 0.01
SF1-220ENST00000626028 IBA57-AS1B1ANH7 110 aa15.1■□□□□ 0.01
SF1-220ENST00000626028 SPANXN1Q5VSR9 72 aa15.1■□□□□ 0.01
SF1-220ENST00000626028 SPATA12Q7Z6I5 190 aa15.1■□□□□ 0.01
SF1-220ENST00000626028 DNAH11Q96DT5 4516 aa15.1■□□□□ 0.01
SF1-220ENST00000626028 KIAA1109Q2LD37 5005 aa15.09■□□□□ 0.01
SF1-220ENST00000626028 RAB19A4D1S5 217 aa15.09■□□□□ 0.01
SF1-220ENST00000626028 LAGE3Q14657 143 aa15.09■□□□□ 0.01
SF1-220ENST00000626028 ALKAL2Q6UX46 152 aa15.09■□□□□ 0.01
SF1-220ENST00000626028 TRBV20OR9-2A0A075B6H5 130 aa15.08■□□□□ 0
SF1-220ENST00000626028 RPL36AP83881 106 aaKnown RBP15.08■□□□□ 0
SF1-220ENST00000626028 OR10G8Q8NGN5 311 aa15.08■□□□□ 0
SF1-220ENST00000626028 RPL36ALQ969Q0 106 aaKnown RBP15.08■□□□□ 0
SF1-220ENST00000626028 DYNC1H1Q14204 4646 aaKnown RBP15.07■□□□□ 0
SF1-220ENST00000626028 TRBV7-3A0A075B6L6 115 aa15.07■□□□□ 0
SF1-220ENST00000626028 F2Z2F3 143 aa15.07■□□□□ 0
SF1-220ENST00000626028 TMEM250H0YL14 139 aa15.07■□□□□ 0
SF1-220ENST00000626028 P01737 135 aa15.07■□□□□ 0
SF1-220ENST00000626028 OR2D3Q8NGH3 330 aa15.07■□□□□ 0
SF1-220ENST00000626028 PGPEP1Q9NXJ5 209 aa15.07■□□□□ 0
SF1-220ENST00000626028 Q9UF83 564 aa15.07■□□□□ 0
SF1-220ENST00000626028 TNFRSF18Q9Y5U5 241 aa15.07■□□□□ 0
SF1-220ENST00000626028 NDUFS6O75380 124 aaKnown RBP15.06■□□□□ 0
SF1-220ENST00000626028 CDK2AP2O75956 126 aa15.06■□□□□ 0
SF1-220ENST00000626028 IGLC6P0CF74 106 aa15.06■□□□□ 0
SF1-220ENST00000626028 CDPF1Q6NVV7 123 aa15.06■□□□□ 0
SF1-220ENST00000626028 AP1S3Q96PC3 154 aa15.06■□□□□ 0
SF1-220ENST00000626028 SMIM17P0DL12 118 aa15.05■□□□□ -0
SF1-220ENST00000626028 CACNG7P62955 275 aa15.05■□□□□ -0
SF1-220ENST00000626028 FER1L6-AS1Q8NA97 138 aa15.05■□□□□ -0
SF1-220ENST00000626028 HERC2O95714 4834 aa15.04■□□□□ -0
SF1-220ENST00000626028 RBFOX3A6NFN3 312 aa15.04■□□□□ -0
SF1-220ENST00000626028 ZNF56Q15929 161 aa15.04■□□□□ -0
SF1-220ENST00000626028 A0A087WTM6 91 aa15.03■□□□□ -0
SF1-220ENST00000626028 UBE2D3P61077 147 aa15.03■□□□□ -0
SF1-220ENST00000626028 UBE2D2P62837 147 aa15.03■□□□□ -0
SF1-220ENST00000626028 TOR2AQ5JU69 321 aa15.03■□□□□ -0
SF1-220ENST00000626028 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.03■□□□□ -0
SF1-220ENST00000626028 KIF25-AS1Q9Y6Z4 181 aa15.03■□□□□ -0
SF1-220ENST00000626028 KRTAP10-2P60368 255 aa15.02■□□□□ -0
SF1-220ENST00000626028 WDR73Q6P4I2 378 aa15.02■□□□□ -0
SF1-220ENST00000626028 CHCHD7Q9BUK0 85 aa15.02■□□□□ -0
SF1-220ENST00000626028 A0A1B0GVG6 124 aa15.01□□□□□ -0.01
SF1-220ENST00000626028 IGHV3-30P01768 117 aa15.01□□□□□ -0.01
SF1-220ENST00000626028 IGHV3-33P01772 117 aa15.01□□□□□ -0.01
SF1-220ENST00000626028 IGHV3-30-3P0DP02 117 aa15.01□□□□□ -0.01
SF1-220ENST00000626028 IGHV3-30-5P0DP03 117 aa15.01□□□□□ -0.01
SF1-220ENST00000626028 URGCP-MRPS24S4R325 110 aa15.01□□□□□ -0.01
SF1-220ENST00000626028 TRAV8-3A0A0A6YYJ7 113 aa15□□□□□ -0.01
SF1-220ENST00000626028 F5H697 171 aa15□□□□□ -0.01
SF1-220ENST00000626028 PSCAO43653 123 aa15□□□□□ -0.01
SF1-220ENST00000626028 TM2D2Q9BX73 214 aa15□□□□□ -0.01
SF1-220ENST00000626028 MUC21A0A0G2JKD1 596 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 MUC21A0A140T8X8 626 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 GZMBP10144 247 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 NKX2-5P52952 324 aaPredicted RBP14.99□□□□□ -0.01
SF1-220ENST00000626028 TMEM97Q5BJF2 176 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 NEXN-AS1Q8NBZ9 246 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 NUDT10Q8NFP7 164 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 OCC1Q8TAD7 63 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 NUDT11Q96G61 164 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 TPPP3Q9BW30 176 aa14.99□□□□□ -0.01
SF1-220ENST00000626028 H7C1H1 209 aa14.98□□□□□ -0.01
SF1-220ENST00000626028 TRGC1P0CF51 173 aa14.98□□□□□ -0.01
SF1-220ENST00000626028 CTRLP40313 264 aa14.98□□□□□ -0.01
SF1-220ENST00000626028 NIT1Q86X76 327 aa14.98□□□□□ -0.01
SF1-220ENST00000626028 CNFNQ9BYD5 112 aa14.98□□□□□ -0.01
SF1-220ENST00000626028 DAZ4Q86SG3 579 aaKnown RBP14.97□□□□□ -0.01
SF1-220ENST00000626028 RPP21Q9H633 154 aaKnown RBP14.97□□□□□ -0.01
SF1-220ENST00000626028 DAZ3Q9NR90 486 aaKnown RBP14.97□□□□□ -0.01
SF1-220ENST00000626028 TRBV6-8A0A0A6YYG3 113 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms