RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 PLXNA1Q9UIW2 1896 aa0.12□□□□□ -2.39
SCARNA4-202ENST00000625402 AKAP11Q9UKA4 1901 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 TRAV12-2A0A075B6T6 113 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 TSPAN19P0C672 248 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 CCL3L1P16619 93 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 ALX1Q15699 326 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 NDUFA11Q86Y39 141 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 C20orf197Q8N268 126 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 MMGT1Q8N4V1 131 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 Q96NJ1 140 aa0.11□□□□□ -2.39
SCARNA4-202ENST00000625402 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 GVQW2A0A096LPI5 108 aaPredicted RBP0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 TRAV12-3A0A0B4J271 114 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 CCDC179H3BU77 68 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 CYP2G1PQ6ZSU1 146 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 CTAGE3PQ8IX95 158 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 MAFIPQ8WZ33 124 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 ERG28Q9UKR5 140 aa0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 VIRMAQ69YN4 1812 aaKnown RBP0.1□□□□□ -2.39
SCARNA4-202ENST00000625402 CELSR2Q9HCU4 2923 aa0.09□□□□□ -2.39
SCARNA4-202ENST00000625402 M0R2Z0 102 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 PIRTP0C851 137 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 C4orf33Q8N1A6 199 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 COX7B2Q8TF08 81 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 PPP1R1CQ8WVI7 109 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 OVOS2A0A0J9YW53 1432 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 DISP2A7MBM2 1401 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 OVOS2Q6IE36 1432 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 CELSR1Q9NYQ6 3014 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 MUC22E2RYF6 1773 aaPredicted RBP0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 NCOR2Q9Y618 2525 aa0.09□□□□□ -2.4
SCARNA4-202ENST00000625402 KMT2DO14686 5537 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 ANK2Q01484 3957 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 RBAKDNA6NC62 111 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 SSBP1Q04837 148 aaKnown RBP0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 SPCS2Q15005 226 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 VSTM2AQ8TAG5 236 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 LZICQ8WZA0 190 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 SAR1AQ9NR31 198 aa0.08□□□□□ -2.4
SCARNA4-202ENST00000625402 UNC13AQ9UPW8 1703 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 PRG4Q92954 1404 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 HRNRQ86YZ3 2850 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 KDM6BO15054 1643 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 F2Z2F3 143 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 K7ERU9 68 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 NPFFO15130 113 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 UBE2G1P62253 170 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 SMIM21Q3B7S5 101 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 C9orf116Q5BN46 136 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 TSTD1Q8NFU3 115 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 C10orf82Q8WW14 230 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 ANP32BQ92688 251 aaKnown RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 PRR15LQ9BU68 103 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 PHIPQ8WWQ0 1821 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 UBR5O95071 2799 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 ZNF142P52746 1687 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 UNC79Q9P2D8 2635 aa0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 TNS1Q9HBL0 1735 aaKnown RBP0.07□□□□□ -2.4
SCARNA4-202ENST00000625402 SSC5DA1L4H1 1573 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 SOGA1O94964 1423 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 TRBV7-1A0A0A6YYK4 115 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 CLPSL1A2RUU4 121 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 MCRIP1C9JLW8 97 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 J3QR89 54 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 Q6ZUT4 128 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 SDF2Q99470 211 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 BPESC1Q9GZL8 116 aa0.06□□□□□ -2.4
SCARNA4-202ENST00000625402 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 TRGV1A0A0A0MS02 117 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 NCR2O95944 276 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 COX4I1P13073 169 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 RPS25P62851 125 aaKnown RBP0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 SPANXN1Q5VSR9 72 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 SLC48A1Q6P1K1 146 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 TMEM242Q9NWH2 141 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 COPZ2Q9P299 210 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 V9GYV3 84 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 ARFGEF1Q9Y6D6 1849 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 ADGRB1O14514 1584 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 SPTBN2O15020 2390 aa0.05□□□□□ -2.4
SCARNA4-202ENST00000625402 NMBP08949 121 aa0.04□□□□□ -2.4
SCARNA4-202ENST00000625402 RRAS2P62070 204 aaPredicted RBP0.04□□□□□ -2.4
SCARNA4-202ENST00000625402 SMIM11BQ8TCY0 68 aa0.04□□□□□ -2.4
SCARNA4-202ENST00000625402 CEP152O94986 1710 aa0.04□□□□□ -2.4
SCARNA4-202ENST00000625402 CDK13Q14004 1512 aaKnown RBP0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 ACYP2P14621 99 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 UBE2D1P51668 147 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 EDDM3BP56851 147 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 FAM74A4Q5TZK3 123 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 Q6ZRX8 168 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 RPRMQ9NS64 109 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 NRXN2Q9P2S2 1712 aa0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 IBTKQ9P2D0 1353 aaPredicted RBP0.03□□□□□ -2.4
SCARNA4-202ENST00000625402 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
SCARNA4-202ENST00000625402 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
SCARNA4-202ENST00000625402 LAMB1P07942 1786 aa0.02□□□□□ -2.41
SCARNA4-202ENST00000625402 HIVEP3Q5T1R4 2406 aa0.02□□□□□ -2.41
SCARNA4-202ENST00000625402 PARP14Q460N5 1801 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms