RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 PFDN1O60925 122 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 CCL20P78556 96 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 GAGE1Q13065 139 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 GAGE4Q13068 117 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 GAGE5Q13069 117 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 PHLDA3Q9Y5J5 127 aa10.72□□□□□ -0.69
DDB2-216ENST00000622878 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
DDB2-216ENST00000622878 LRCOL1A6NCL2 159 aa10.71□□□□□ -0.69
DDB2-216ENST00000622878 A0A087WWL8 130 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 M0R381 172 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 IGHV3-33P01772 117 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 CXCL1P09341 107 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 IGHV3-30-3P0DP02 117 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
DDB2-216ENST00000622878 BAGE2Q86Y30 109 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 Q8N1X5 172 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 Q8N3U1 123 aa10.7□□□□□ -0.7
DDB2-216ENST00000622878 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
DDB2-216ENST00000622878 TCTE3Q8IZS6 198 aa10.69□□□□□ -0.7
DDB2-216ENST00000622878 ZFP82Q8N141 532 aa10.69□□□□□ -0.7
DDB2-216ENST00000622878 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
DDB2-216ENST00000622878 SSBP4Q9BWG4 385 aaPredicted RBP10.69□□□□□ -0.7
DDB2-216ENST00000622878 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
DDB2-216ENST00000622878 RAB5CP51148 216 aa10.68□□□□□ -0.7
DDB2-216ENST00000622878 LAGE3Q14657 143 aa10.68□□□□□ -0.7
DDB2-216ENST00000622878 MANBALQ9NQG1 85 aa10.68□□□□□ -0.7
DDB2-216ENST00000622878 VPS13BQ7Z7G8 4022 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 A0A087WWC5 75 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 SNAI2O43623 268 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 KRTAP10-1P60331 282 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 OR10AG1Q8NH19 301 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 DERL1Q9BUN8 251 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 Q9HAA7 133 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 GNG13Q9P2W3 67 aa10.67□□□□□ -0.7
DDB2-216ENST00000622878 SULT1A2P50226 295 aa10.66□□□□□ -0.7
DDB2-216ENST00000622878 XGP55808 180 aa10.66□□□□□ -0.7
DDB2-216ENST00000622878 EIF5AL1Q6IS14 154 aaKnown RBP10.66□□□□□ -0.7
DDB2-216ENST00000622878 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
DDB2-216ENST00000622878 PSCAO43653 123 aa10.65□□□□□ -0.7
DDB2-216ENST00000622878 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
DDB2-216ENST00000622878 OR5AL1P0C617 328 aa10.65□□□□□ -0.7
DDB2-216ENST00000622878 Q6ZNX1 250 aa10.65□□□□□ -0.7
DDB2-216ENST00000622878 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
DDB2-216ENST00000622878 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
DDB2-216ENST00000622878 C1QBP02746 253 aa10.64□□□□□ -0.71
DDB2-216ENST00000622878 UBE2D3P61077 147 aa10.64□□□□□ -0.71
DDB2-216ENST00000622878 UBE2D2P62837 147 aa10.64□□□□□ -0.71
DDB2-216ENST00000622878 PRR27Q6MZM9 219 aa10.64□□□□□ -0.71
DDB2-216ENST00000622878 OR10G8Q8NGN5 311 aa10.64□□□□□ -0.71
DDB2-216ENST00000622878 RAB4BP61018 213 aa10.63□□□□□ -0.71
DDB2-216ENST00000622878 CENPWQ5EE01 88 aa10.63□□□□□ -0.71
DDB2-216ENST00000622878 NIT1Q86X76 327 aa10.63□□□□□ -0.71
DDB2-216ENST00000622878 Q8N814 137 aa10.63□□□□□ -0.71
DDB2-216ENST00000622878 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
DDB2-216ENST00000622878 MUC21A0A0G2JKD1 596 aa10.62□□□□□ -0.71
DDB2-216ENST00000622878 MUC21A0A140T8X8 626 aa10.62□□□□□ -0.71
DDB2-216ENST00000622878 GCSHP23434 173 aa10.62□□□□□ -0.71
DDB2-216ENST00000622878 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
DDB2-216ENST00000622878 MEF2BQ02080 365 aaPredicted RBP10.62□□□□□ -0.71
DDB2-216ENST00000622878 SLC51BQ86UW2 128 aa10.62□□□□□ -0.71
DDB2-216ENST00000622878 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
DDB2-216ENST00000622878 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
DDB2-216ENST00000622878 KIF25-AS1Q9Y6Z4 181 aa10.62□□□□□ -0.71
DDB2-216ENST00000622878 TRAV8-3A0A0A6YYJ7 113 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 RAB19A4D1S5 217 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 TEX46H3BTG2 121 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 WFDC2Q14508 124 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 TM2D2Q9BX73 214 aa10.61□□□□□ -0.71
DDB2-216ENST00000622878 SRRM2Q9UQ35 2752 aaKnown RBP10.61□□□□□ -0.71
DDB2-216ENST00000622878 TRBV20OR9-2A0A075B6H5 130 aa10.6□□□□□ -0.71
DDB2-216ENST00000622878 IGLC6P0CF74 106 aa10.6□□□□□ -0.71
DDB2-216ENST00000622878 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
DDB2-216ENST00000622878 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
DDB2-216ENST00000622878 IGLV5-52A0A0A0MRZ9 124 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 PDE6DO43924 150 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 GZMBP10144 247 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 BCL2P10415 239 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 ZNF56Q15929 161 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 TOR2AQ5JU69 321 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 DNAJC30Q96LL9 226 aa10.59□□□□□ -0.71
DDB2-216ENST00000622878 GNG4P50150 75 aa10.58□□□□□ -0.72
DDB2-216ENST00000622878 C9orf62Q8N4C0 152 aa10.58□□□□□ -0.72
DDB2-216ENST00000622878 CHCHD7Q9BUK0 85 aa10.58□□□□□ -0.72
DDB2-216ENST00000622878 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
DDB2-216ENST00000622878 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
DDB2-216ENST00000622878 IFNA1P01562 189 aa10.57□□□□□ -0.72
DDB2-216ENST00000622878 MED9Q9NWA0 146 aa10.57□□□□□ -0.72
DDB2-216ENST00000622878 VAX2Q9UIW0 290 aa10.57□□□□□ -0.72
DDB2-216ENST00000622878 URGCP-MRPS24S4R325 110 aa10.57□□□□□ -0.72
DDB2-216ENST00000622878 RPS20P60866 119 aaKnown RBP10.56□□□□□ -0.72
DDB2-216ENST00000622878 SSTP61278 116 aa10.56□□□□□ -0.72
DDB2-216ENST00000622878 ATRAIDQ6UW56 229 aa10.56□□□□□ -0.72
DDB2-216ENST00000622878 FER1L6-AS1Q8NA97 138 aa10.56□□□□□ -0.72
DDB2-216ENST00000622878 OR2D3Q8NGH3 330 aa10.56□□□□□ -0.72
DDB2-216ENST00000622878 AP1S3Q96PC3 154 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms