RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 J3KT08 172 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 IGHV4-39P01824 125 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 NBL1P41271 181 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 TRAV41A0A0B4J266 112 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 IGKCP01834 107 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 ATP6V0E2Q8NHE4 81 aa8.22□□□□□ -1.09
CDH1-214ENST00000621016 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.09
CDH1-214ENST00000621016 MRPS12O15235 138 aaKnown RBP8.21□□□□□ -1.09
CDH1-214ENST00000621016 PMVKQ15126 192 aa8.21□□□□□ -1.09
CDH1-214ENST00000621016 NSUN5P1Q3KNT7 163 aa8.21□□□□□ -1.09
CDH1-214ENST00000621016 LY6G5BQ8NDX9 201 aa8.21□□□□□ -1.09
CDH1-214ENST00000621016 DSCR8Q96T75 97 aa8.21□□□□□ -1.09
CDH1-214ENST00000621016 SLC25A20O43772 301 aa8.21□□□□□ -1.1
CDH1-214ENST00000621016 HOXB4P17483 251 aaPredicted RBP8.21□□□□□ -1.1
CDH1-214ENST00000621016 RPL35AP18077 110 aaKnown RBP8.21□□□□□ -1.1
CDH1-214ENST00000621016 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.1
CDH1-214ENST00000621016 MSRB2Q9Y3D2 182 aa8.21□□□□□ -1.1
CDH1-214ENST00000621016 J3QLI3 93 aa8.21□□□□□ -1.1
CDH1-214ENST00000621016 LEPP41159 167 aa8.21□□□□□ -1.1
CDH1-214ENST00000621016 MRPL35Q9NZE8 188 aaKnown RBP8.21□□□□□ -1.1
CDH1-214ENST00000621016 Q8N1Y9 231 aa8.2□□□□□ -1.1
CDH1-214ENST00000621016 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
CDH1-214ENST00000621016 RNF5Q99942 180 aa8.2□□□□□ -1.1
CDH1-214ENST00000621016 IGF1P05019 195 aa8.2□□□□□ -1.1
CDH1-214ENST00000621016 Q8N9W7 124 aa8.2□□□□□ -1.1
CDH1-214ENST00000621016 NPBQ8NG41 125 aa8.2□□□□□ -1.1
CDH1-214ENST00000621016 NDUFA7O95182 113 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 KLRB1Q12918 225 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 MYMXA0A1B0GTQ4 84 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 M0R381 172 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 TRGV3P03979 118 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 LYPD1Q8N2G4 141 aa8.19□□□□□ -1.1
CDH1-214ENST00000621016 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 hADV29S1A0JD25 119 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 OVOL3O00110 214 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 IGHG4P01861 327 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 HERVK_113P61574 105 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 SPANXN1Q5VSR9 72 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 RNF152Q8N8N0 203 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 MYOZ3Q8TDC0 251 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 NAV2Q8IVL1 2488 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 ODF3BA8MYP8 253 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 M0R1W7 72 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 C16orf92Q96LL3 132 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 AGPAT4-IT1Q9H0P7 198 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 F6UB75 175 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 ATP5LO75964 103 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
CDH1-214ENST00000621016 Q1RN00 199 aa8.17□□□□□ -1.1
CDH1-214ENST00000621016 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
CDH1-214ENST00000621016 KLHL30-AS1Q8NEE0 82 aa8.17□□□□□ -1.1
CDH1-214ENST00000621016 C11orf21Q9P2W6 132 aa8.17□□□□□ -1.1
CDH1-214ENST00000621016 PDE6HQ13956 83 aa8.17□□□□□ -1.1
CDH1-214ENST00000621016 MDFICQ9P1T7 246 aa8.17□□□□□ -1.1
CDH1-214ENST00000621016 BUB3O43684 328 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 DPM2O94777 84 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 DUSP14O95147 198 aaKnown RBP8.16□□□□□ -1.1
CDH1-214ENST00000621016 EFNA4P52798 201 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 C19orf84I3L1E1 186 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 WIPF1O43516 503 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 IGKV3-20P01619 116 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
CDH1-214ENST00000621016 S100A4P26447 101 aaKnown RBP8.16□□□□□ -1.1
CDH1-214ENST00000621016 TMEM158Q8WZ71 300 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 CCDC140Q96MF4 163 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 METTL26Q96S19 204 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
CDH1-214ENST00000621016 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 SEC61GP60059 68 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 DTX2Q86UW9 622 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 ZNF462Q96JM2 2506 aa8.16□□□□□ -1.1
CDH1-214ENST00000621016 NACAE9PAV3 2078 aa8.15□□□□□ -1.1
CDH1-214ENST00000621016 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
CDH1-214ENST00000621016 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
CDH1-214ENST00000621016 IGKV3D-20A0A0C4DH25 116 aa8.15□□□□□ -1.1
CDH1-214ENST00000621016 TRBV7-3A0A075B6L6 115 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 MGPP08493 103 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 GNLYP22749 145 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 C11orf71Q6IPW1 123 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 IGSF10Q6WRI0 2623 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
CDH1-214ENST00000621016 LYRM7Q5U5X0 104 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 MAPK1IP1LQ8NDC0 245 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 ZNF815PA8K554 130 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 BLCAPP62952 87 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
CDH1-214ENST00000621016 ABCA2Q9BZC7 2435 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 RNASE4P34096 147 aaKnown RBP8.13□□□□□ -1.11
CDH1-214ENST00000621016 UBE2E1P51965 193 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 Q6ZS46 218 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
CDH1-214ENST00000621016 RNF185Q96GF1 192 aa8.13□□□□□ -1.11
CDH1-214ENST00000621016 ANKRD17O75179 2603 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms