RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	PRR27	Q6MZM9	219 aa		11.36	□□□□□ -0.59
CCND3-222	ENST00000612455		Q9UF83	564 aa		11.36	□□□□□ -0.59
CCND3-222	ENST00000612455	DYNC1H1	Q14204	4646 aa	Known RBP	11.36	□□□□□ -0.59
CCND3-222	ENST00000612455		M0R381	172 aa		11.35	□□□□□ -0.59
CCND3-222	ENST00000612455	GNG4	P50150	75 aa		11.35	□□□□□ -0.59
CCND3-222	ENST00000612455	ATP6V0E2	Q8NHE4	81 aa		11.35	□□□□□ -0.59
CCND3-222	ENST00000612455	LY96	Q9Y6Y9	160 aa		11.35	□□□□□ -0.59
CCND3-222	ENST00000612455	LINC00315	P59091	139 aa		11.34	□□□□□ -0.59
CCND3-222	ENST00000612455		Q6ZRN7	208 aa	Predicted RBP	11.34	□□□□□ -0.59
CCND3-222	ENST00000612455	C14orf178	Q8N769	122 aa	Predicted RBP	11.34	□□□□□ -0.59
CCND3-222	ENST00000612455	OR10AG1	Q8NH19	301 aa		11.34	□□□□□ -0.59
CCND3-222	ENST00000612455	GTSF1L	Q9H1H1	148 aa		11.34	□□□□□ -0.59
CCND3-222	ENST00000612455	TRAV9-2	A0A087WT02	112 aa		11.33	□□□□□ -0.6
CCND3-222	ENST00000612455		A0A087WWL8	130 aa		11.33	□□□□□ -0.6
CCND3-222	ENST00000612455	RBFOX3	A6NFN3	312 aa		11.33	□□□□□ -0.6
CCND3-222	ENST00000612455	LELP1	Q5T871	98 aa		11.33	□□□□□ -0.6
CCND3-222	ENST00000612455	DAZAP1	Q96EP5	407 aa	Known RBP	11.33	□□□□□ -0.6
CCND3-222	ENST00000612455	IGLC6	P0CF74	106 aa		11.32	□□□□□ -0.6
CCND3-222	ENST00000612455	BIN3	Q9NQY0	253 aa		11.32	□□□□□ -0.6
CCND3-222	ENST00000612455	IGHV3-38	A0A0C4DH36	116 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	GAGE12J	A6NER3	117 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	TMEM250	H0YL14	139 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	NDUFS6	O75380	124 aa	Known RBP	11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	EVI2A	P22794	236 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	RPS20	P60866	119 aa	Known RBP	11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	GAGE1	Q13065	139 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	GAGE4	Q13068	117 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	GAGE5	Q13069	117 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	GAGE13	Q4V321	117 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	FAM74A4	Q5TZK3	123 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	OR2D3	Q8NGH3	330 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	TNFRSF18	Q9Y5U5	241 aa		11.31	□□□□□ -0.6
CCND3-222	ENST00000612455	TRAV8-6	A0A0B4J262	113 aa		11.3	□□□□□ -0.6
CCND3-222	ENST00000612455	TRBV10-1	A0A0K0K1A3	114 aa		11.3	□□□□□ -0.6
CCND3-222	ENST00000612455	LINC01556	Q5JQF7	62 aa		11.3	□□□□□ -0.6
CCND3-222	ENST00000612455	OCC1	Q8TAD7	63 aa		11.3	□□□□□ -0.6
CCND3-222	ENST00000612455	KIF25-AS1	Q9Y6Z4	181 aa		11.3	□□□□□ -0.6
CCND3-222	ENST00000612455	GZMB	P10144	247 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	RAB4B	P61018	213 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	SPANXN1	Q5VSR9	72 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	C10orf126	Q8N4M7	172 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	NUDT10	Q8NFP7	164 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	NUDT11	Q96G61	164 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	KIAA1109	Q2LD37	5005 aa		11.29	□□□□□ -0.6
CCND3-222	ENST00000612455	MUC21	A0A0G2JKD1	596 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	MUC21	A0A140T8X8	626 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455		P01737	135 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	OR10J3	Q5JRS4	329 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	NFE4	Q86UQ8	179 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	FER1L6-AS1	Q8NA97	138 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	OR10G8	Q8NGN5	311 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	MSRB1	Q9NZV6	116 aa		11.28	□□□□□ -0.6
CCND3-222	ENST00000612455	XKRY2	A2RUG3	117 aa		11.27	□□□□□ -0.61
CCND3-222	ENST00000612455		K7EN84	100 aa		11.27	□□□□□ -0.61
CCND3-222	ENST00000612455	FAM210A	Q96ND0	272 aa		11.27	□□□□□ -0.61
CCND3-222	ENST00000612455	HERC2	O95714	4834 aa		11.26	□□□□□ -0.61
CCND3-222	ENST00000612455		A0A087WWC5	75 aa		11.26	□□□□□ -0.61
CCND3-222	ENST00000612455	IBA57-AS1	B1ANH7	110 aa		11.26	□□□□□ -0.61
CCND3-222	ENST00000612455		F2Z2F3	143 aa		11.26	□□□□□ -0.61
CCND3-222	ENST00000612455	WDR73	Q6P4I2	378 aa		11.26	□□□□□ -0.61
CCND3-222	ENST00000612455	TRBV7-3	A0A075B6L6	115 aa		11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	UBE2D3	P61077	147 aa		11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	UBE2D2	P62837	147 aa		11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	CACNG7	P62955	275 aa		11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	RPL36A	P83881	106 aa	Known RBP	11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	TOR2A	Q5JU69	321 aa		11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	RPL36AL	Q969Q0	106 aa	Known RBP	11.25	□□□□□ -0.61
CCND3-222	ENST00000612455	LYZL1	Q6UWQ5	148 aa		11.24	□□□□□ -0.61
CCND3-222	ENST00000612455	NEXN-AS1	Q8NBZ9	246 aa		11.24	□□□□□ -0.61
CCND3-222	ENST00000612455	EIF5A2	Q9GZV4	153 aa	Known RBP	11.24	□□□□□ -0.61
CCND3-222	ENST00000612455	RNASE7	Q9H1E1	156 aa	Known RBP	11.24	□□□□□ -0.61
CCND3-222	ENST00000612455	SST	P61278	116 aa		11.23	□□□□□ -0.61
CCND3-222	ENST00000612455	ZNF56	Q15929	161 aa		11.23	□□□□□ -0.61
CCND3-222	ENST00000612455	TEX261	Q6UWH6	196 aa		11.23	□□□□□ -0.61
CCND3-222	ENST00000612455	FAM231D	Q6ZW35	169 aa		11.23	□□□□□ -0.61
CCND3-222	ENST00000612455	AP1S3	Q96PC3	154 aa		11.23	□□□□□ -0.61
CCND3-222	ENST00000612455	RPP21	Q9H633	154 aa	Known RBP	11.23	□□□□□ -0.61
CCND3-222	ENST00000612455	IGHV3-30	P01768	117 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	IGHV3-33	P01772	117 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	SRP19	P09132	144 aa	Known RBP	11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	IGHV3-30-3	P0DP02	117 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	IGHV3-30-5	P0DP03	117 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	SPATA12	Q7Z6I5	190 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	TPPP3	Q9BW30	176 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455	CNFN	Q9BYD5	112 aa		11.22	□□□□□ -0.61
CCND3-222	ENST00000612455		F5H697	171 aa		11.21	□□□□□ -0.61
CCND3-222	ENST00000612455	SMIM17	P0DL12	118 aa		11.21	□□□□□ -0.61
CCND3-222	ENST00000612455	NTF3	P20783	257 aa		11.21	□□□□□ -0.61
CCND3-222	ENST00000612455	CTRL	P40313	264 aa		11.21	□□□□□ -0.61
CCND3-222	ENST00000612455	KRTAP10-2	P60368	255 aa		11.21	□□□□□ -0.61
CCND3-222	ENST00000612455	LRP1B	Q9NZR2	4599 aa		11.21	□□□□□ -0.62
CCND3-222	ENST00000612455	C16orf90	A8MZG2	172 aa		11.2	□□□□□ -0.62
CCND3-222	ENST00000612455	LAGE3	Q14657	143 aa		11.2	□□□□□ -0.62
CCND3-222	ENST00000612455	NIT1	Q86X76	327 aa		11.2	□□□□□ -0.62
CCND3-222	ENST00000612455		Q8N3U1	123 aa		11.2	□□□□□ -0.62
CCND3-222	ENST00000612455		A0A087WTM6	91 aa		11.19	□□□□□ -0.62
CCND3-222	ENST00000612455		M0QY20	66 aa		11.19	□□□□□ -0.62
CCND3-222	ENST00000612455	GATC	O43716	136 aa	Known RBP	11.19	□□□□□ -0.62
CCND3-222	ENST00000612455	FOXA3	P55318	350 aa	Predicted RBP	11.19	□□□□□ -0.62
CCND3-222	ENST00000612455	GTSF1	Q8WW33	167 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms