RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 PPP1R17O96001 155 aa9□□□□□ -0.97
TPM3-223ENST00000611659 RNASE3P12724 160 aaKnown RBP9□□□□□ -0.97
TPM3-223ENST00000611659 UNQ9165/PRO28630Q6UXU0 137 aa9□□□□□ -0.97
TPM3-223ENST00000611659 ZNRF2Q8NHG8 242 aa9□□□□□ -0.97
TPM3-223ENST00000611659 IGIPA6NJ69 53 aa9□□□□□ -0.97
TPM3-223ENST00000611659 TMEM262E9PQX1 116 aa9□□□□□ -0.97
TPM3-223ENST00000611659 SAA4P35542 130 aa9□□□□□ -0.97
TPM3-223ENST00000611659 LENEPQ9Y5L5 61 aa9□□□□□ -0.97
TPM3-223ENST00000611659 CENPVL3A0A0U1RRI6 287 aa9□□□□□ -0.97
TPM3-223ENST00000611659 B5MCH6 92 aa9□□□□□ -0.97
TPM3-223ENST00000611659 CDSNQ15517 529 aa9□□□□□ -0.97
TPM3-223ENST00000611659 ITLN2Q8WWU7 325 aaPredicted RBP9□□□□□ -0.97
TPM3-223ENST00000611659 OPRPNQ99935 248 aaPredicted RBP9□□□□□ -0.97
TPM3-223ENST00000611659 TRBV12-3P01733 135 aa8.99□□□□□ -0.97
TPM3-223ENST00000611659 IGHV4-39P01824 125 aa8.99□□□□□ -0.97
TPM3-223ENST00000611659 SRD5A1P18405 259 aa8.99□□□□□ -0.97
TPM3-223ENST00000611659 U3KQE9 123 aa8.99□□□□□ -0.97
TPM3-223ENST00000611659 SDHAF1A6NFY7 115 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 OVOL1O14753 267 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 SNCGO76070 127 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 IGHV1-69DA0A0B4J2H0 117 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 SBSPONQ8IVN8 264 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
TPM3-223ENST00000611659 IGHV3OR16-10A0A075B7F0 116 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 VCYO14598 125 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
TPM3-223ENST00000611659 GAGE2BQ13066 116 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 GAGE5Q13069 117 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 GAGE6Q13070 117 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 GAGE2EQ4V326 116 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 GAGE2DQ9UEU5 116 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 C1orf122Q6ZSJ8 110 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
TPM3-223ENST00000611659 CCL21O00585 134 aa8.96□□□□□ -0.97
TPM3-223ENST00000611659 IGHV3-33P01772 117 aa8.96□□□□□ -0.97
TPM3-223ENST00000611659 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.97
TPM3-223ENST00000611659 AJUBAQ96IF1 538 aa8.96□□□□□ -0.97
TPM3-223ENST00000611659 TRAV41A0A0B4J266 112 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 TRAV4A0A0B4J268 109 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 POLR2KP53803 58 aaKnown RBP8.96□□□□□ -0.98
TPM3-223ENST00000611659 SIRPDQ9H106 197 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 MUC4Q99102 2169 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 CELSR1Q9NYQ6 3014 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 NCOR2Q9Y618 2525 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 CRLF1O75462 422 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 ELANEP08246 267 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 LINC00315P59091 139 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 ZNF876PQ49A33 203 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 AMELXQ99217 191 aa8.96□□□□□ -0.98
TPM3-223ENST00000611659 HRNRQ86YZ3 2850 aaPredicted RBP8.95□□□□□ -0.98
TPM3-223ENST00000611659 ADARB2-AS1A8MUL3 147 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
TPM3-223ENST00000611659 TIMM17AQ99595 171 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 KIF25-AS1Q9Y6Z4 181 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 CHD8Q9HCK8 2581 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 ZFHX3Q15911 3703 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 UBE2E1P51965 193 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 ZNF56Q15929 161 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 TTC32Q5I0X7 151 aa8.95□□□□□ -0.98
TPM3-223ENST00000611659 PRSS2P07478 247 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 Q8N1Y9 231 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 CITED1Q99966 193 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 ZNF580Q9UK33 172 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 MED14OSP0DP75 135 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 C5orf56Q8N8D9 126 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 TMEM263Q8WUH6 116 aaKnown RBP8.94□□□□□ -0.98
TPM3-223ENST00000611659 IGHV4OR15-8A0A075B7B6 117 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 A0A087WW49 117 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 IGKV3-20P01619 116 aa8.94□□□□□ -0.98
TPM3-223ENST00000611659 SOCS3O14543 225 aa8.93□□□□□ -0.98
TPM3-223ENST00000611659 NHLRC4P0CG21 123 aaPredicted RBP8.93□□□□□ -0.98
TPM3-223ENST00000611659 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
TPM3-223ENST00000611659 SPTBN4Q9H254 2564 aa8.93□□□□□ -0.98
TPM3-223ENST00000611659 NDUFV3P56181 108 aaKnown RBP8.93□□□□□ -0.98
TPM3-223ENST00000611659 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
TPM3-223ENST00000611659 UBTD1Q9HAC8 227 aa8.93□□□□□ -0.98
TPM3-223ENST00000611659 A0A0J9YXV3 536 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 RHODO00212 210 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 LEPROTO15243 131 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 NPC2P61916 151 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 SPXQ9BT56 116 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 RHPN1-AS1Q9BWJ2 59 aa8.92□□□□□ -0.98
TPM3-223ENST00000611659 TMEM223A0PJW6 202 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 FAM223BA6NKX1 122 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 NPFFO15130 113 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 FAM223AQ8IWN6 122 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 SPG11Q96JI7 2443 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 CCDC179H3BU77 68 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 TRBV27A0A0K0K1C4 114 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 NDUFA4O00483 81 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 IFITM1P13164 125 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 KLK9Q2XQG4 91 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 C11orf71Q6IPW1 123 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 FAM19A4Q96LR4 140 aa8.91□□□□□ -0.98
TPM3-223ENST00000611659 KLK9Q9UKQ9 250 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms