RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 GATA4P43694 442 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 NPC2P61916 151 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 CADP27708 2225 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
CTCFL-218ENST00000608440 TRAV13-1A0A0B4J241 112 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 KLRB1Q12918 225 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 DEFB121Q5J5C9 76 aa9.54□□□□□ -0.88
CTCFL-218ENST00000608440 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 DLX6P56179 175 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 TMEM258P61165 79 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 TRAV12-3A0A0B4J271 114 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 TSHBP01222 138 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 ATP5G1P05496 136 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 COX8CQ7Z4L0 72 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 DYNAPQ8N1N2 210 aa9.53□□□□□ -0.88
CTCFL-218ENST00000608440 ZZEF1O43149 2961 aa9.52□□□□□ -0.88
CTCFL-218ENST00000608440 CHD8Q9HCK8 2581 aa9.52□□□□□ -0.88
CTCFL-218ENST00000608440 IGHV3OR16-8A0A075B7F1 116 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 COX6CP09669 75 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 IGFL3Q6UXB1 125 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 LINC00336Q6ZUF6 198 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 I3L2K1 104 aa9.52□□□□□ -0.89
CTCFL-218ENST00000608440 PDE6HQ13956 83 aa9.51□□□□□ -0.89
CTCFL-218ENST00000608440 MSMPQ1L6U9 139 aa9.51□□□□□ -0.89
CTCFL-218ENST00000608440 TP53TG1Q9Y2A0 90 aa9.51□□□□□ -0.89
CTCFL-218ENST00000608440 M0R381 172 aa9.51□□□□□ -0.89
CTCFL-218ENST00000608440 MGPP08493 103 aa9.51□□□□□ -0.89
CTCFL-218ENST00000608440 RPL39P62891 51 aaKnown RBP9.51□□□□□ -0.89
CTCFL-218ENST00000608440 SPANXCQ9NY87 97 aa9.51□□□□□ -0.89
CTCFL-218ENST00000608440 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 ATOX1O00244 68 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 ACYP1P07311 99 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 PRB3Q04118 309 aaPredicted RBP9.5□□□□□ -0.89
CTCFL-218ENST00000608440 TMEM190Q8WZ59 177 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 GAFA1Q96PS6 74 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 TRBV7-1A0A0A6YYK4 115 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 MALP21145 153 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 PRO0628Q9UI54 55 aa9.5□□□□□ -0.89
CTCFL-218ENST00000608440 TLN1Q9Y490 2541 aaKnown RBP9.5□□□□□ -0.89
CTCFL-218ENST00000608440 LST1O00453 97 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 PAPPA-AS1Q5QFB9 102 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 RNF182Q8N6D2 247 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 SPTA1P02549 2419 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 K7ENP7 123 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 CNEP1R1Q8N9A8 125 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 DPH3P1Q9H4G8 78 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
CTCFL-218ENST00000608440 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 SDIM1Q6ZPB5 146 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 C9orf106Q8NAJ2 232 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 I3L3M4 83 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 PFN2P35080 140 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 SEC61GP60059 68 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
CTCFL-218ENST00000608440 K7EIM0 57 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 LHBP01229 141 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 ARHGAP32A7KAX9 2087 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 Q6ZT83 130 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 IGHV3-23P01764 117 aa9.47□□□□□ -0.89
CTCFL-218ENST00000608440 IGKV3-15P01624 115 aa9.46□□□□□ -0.89
CTCFL-218ENST00000608440 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.89
CTCFL-218ENST00000608440 RNF223E7ERA6 249 aa9.46□□□□□ -0.9
CTCFL-218ENST00000608440 CXCL5P42830 114 aa9.46□□□□□ -0.9
CTCFL-218ENST00000608440 MBD3L2Q8NHZ7 208 aaPredicted RBP9.46□□□□□ -0.9
CTCFL-218ENST00000608440 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.9
CTCFL-218ENST00000608440 ADGRG4Q8IZF6 3080 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 A0A087WVE0 104 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 DCANP1Q8TF63 244 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 AGPAT4-IT1Q9H0P7 198 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 LINC00574Q9H8X3 128 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 RELNP78509 3460 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
CTCFL-218ENST00000608440 RNF7Q9UBF6 113 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 DKK4Q9UBT3 224 aa9.45□□□□□ -0.9
CTCFL-218ENST00000608440 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 CRYGBP07316 175 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 GFRALQ6UXV0 394 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 Q8NA96 180 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 LEPROTO15243 131 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
CTCFL-218ENST00000608440 DAZ2Q13117 558 aaKnown RBP9.44□□□□□ -0.9
CTCFL-218ENST00000608440 SEM1Q6ZVN7 128 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
CTCFL-218ENST00000608440 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms