RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 SLIT3O75094 1523 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 PRDM15P57071 1507 aaPredicted RBP3.03□□□□□ -1.92
TUBE1-209ENST00000604814 CHD1O14646 1710 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 ADIRFQ15847 76 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 SMCO4Q9NRQ5 59 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 CDC42SE1Q9NRR8 79 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 ANAPC11Q9NYG5 84 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 CACFD1Q9UGQ2 172 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 RABAC1Q9UI14 185 aa3.03□□□□□ -1.92
TUBE1-209ENST00000604814 KIAA1549LQ6ZVL6 1849 aa3.03□□□□□ -1.93
TUBE1-209ENST00000604814 PCNX2A6NKB5 2137 aa3.03□□□□□ -1.93
TUBE1-209ENST00000604814 CCL16O15467 120 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 IGHV3-33P01772 117 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 MPV17LQ2QL34 196 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 C22orf24Q9Y442 160 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 SPCS1Q9Y6A9 102 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 LAMC3Q9Y6N6 1575 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 TOPAZ1Q8N9V7 1692 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 TRAV12-3A0A0B4J271 114 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 C4orf3Q8WVX3 66 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 TRGV9Q99603 122 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 ST20Q9HBF5 79 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 ORMDL1Q9P0S3 153 aa3.02□□□□□ -1.93
TUBE1-209ENST00000604814 ANK1P16157 1881 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 LAMB4A4D0S4 1761 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 COL2A1P02458 1487 aaPredicted RBP3.01□□□□□ -1.93
TUBE1-209ENST00000604814 MON2Q7Z3U7 1717 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 PDCD5O14737 125 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 NDUFC1O43677 76 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 SIX6O95475 246 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 Q5BKY6 102 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 NXT2Q9NPJ8 142 aaKnown RBP3.01□□□□□ -1.93
TUBE1-209ENST00000604814 MANBALQ9NQG1 85 aa3.01□□□□□ -1.93
TUBE1-209ENST00000604814 COL1A2P08123 1366 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 MUC22E2RYF6 1773 aaPredicted RBP3□□□□□ -1.93
TUBE1-209ENST00000604814 TRBV6-8A0A0A6YYG3 113 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 TRBV10-1A0A0K0K1A3 114 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 A0A1W2PNU3 283 aaPredicted RBP3□□□□□ -1.93
TUBE1-209ENST00000604814 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 H3BRM9 83 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 SH2D6Q7Z4S9 175 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 NDUFA11Q86Y39 141 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 PTPRFP10586 1907 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 CCDC88BA6NC98 1476 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 MYH8P13535 1937 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 IGKV2-28A0A075B6P5 120 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 TRBV7-1A0A0A6YYK4 115 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 SYS1-DBNDD2H3BUS1 97 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 IGKV2D-28P01615 120 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 TPRXLQ17RH7 258 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 AMELYQ99218 206 aa3□□□□□ -1.93
TUBE1-209ENST00000604814 MRPL36Q9P0J6 103 aaKnown RBP3□□□□□ -1.93
TUBE1-209ENST00000604814 TNS1Q9HBL0 1735 aaKnown RBP2.99□□□□□ -1.93
TUBE1-209ENST00000604814 HEATR1Q9H583 2144 aaKnown RBP2.99□□□□□ -1.93
TUBE1-209ENST00000604814 ARHGEF12Q9NZN5 1544 aa2.99□□□□□ -1.93
TUBE1-209ENST00000604814 ETDBQ3ZM63 59 aa2.99□□□□□ -1.93
TUBE1-209ENST00000604814 C10orf128Q5T292 105 aa2.99□□□□□ -1.93
TUBE1-209ENST00000604814 PATE1Q8WXA2 126 aa2.99□□□□□ -1.93
TUBE1-209ENST00000604814 EPRSP07814 1512 aaKnown RBP2.98□□□□□ -1.93
TUBE1-209ENST00000604814 DISP1Q96F81 1524 aa2.98□□□□□ -1.93
TUBE1-209ENST00000604814 NUMA1Q14980 2115 aa2.98□□□□□ -1.93
TUBE1-209ENST00000604814 CLIP1P30622 1438 aa2.98□□□□□ -1.93
TUBE1-209ENST00000604814 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
TUBE1-209ENST00000604814 LIMD2Q9BT23 127 aa2.98□□□□□ -1.93
TUBE1-209ENST00000604814 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
TUBE1-209ENST00000604814 MYOFQ9NZM1 2061 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 IGLV6-57P01721 117 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 SPACA4Q8TDM5 124 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 LAMB2P55268 1798 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 ZFHX2Q9C0A1 2572 aaPredicted RBP2.97□□□□□ -1.93
TUBE1-209ENST00000604814 SHANK2Q9UPX8 1470 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 LAMB1P07942 1786 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 TEX49A0A1B0GTD5 131 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 A0A1W2PPM0 123 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 CYP2G1PQ6ZSU1 146 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 ODF3Q96PU9 254 aa2.97□□□□□ -1.93
TUBE1-209ENST00000604814 PPLO60437 1756 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 RGPD4Q7Z3J3 1758 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 PSME4Q14997 1843 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 PLXNA4Q9HCM2 1894 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 TRAV23DV6A0A075B6W5 121 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 NUPR2A6NF83 97 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 ZNF818PQ6ZRF7 136 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 LRRIQ1Q96JM4 1722 aa2.96□□□□□ -1.94
TUBE1-209ENST00000604814 A0A0G2JND7 137 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 A0A0J9YY99 117 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 UBE2D1P51668 147 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 WFDC2Q14508 124 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 NMSQ5H8A3 153 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 TRBV7-3A0A075B6L6 115 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 A0A1W2PNN7 141 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 SDHAF1A6NFY7 115 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 IGLC2P0DOY2 106 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 IGLC3P0DOY3 106 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 LINC00299Q6ZSB3 139 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 HIGD1BQ9P298 99 aa2.95□□□□□ -1.94
TUBE1-209ENST00000604814 PRO1854Q9UHT4 67 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms