RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 IFNA1P01562 189 aa9.68□□□□□ -0.86
IRF3-224ENST00000599680 RPL35P42766 123 aaKnown RBP9.68□□□□□ -0.86
IRF3-224ENST00000599680 RPL19P84098 196 aaKnown RBP9.68□□□□□ -0.86
IRF3-224ENST00000599680 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
IRF3-224ENST00000599680 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
IRF3-224ENST00000599680 Q9HAA7 133 aa9.68□□□□□ -0.86
IRF3-224ENST00000599680 SCRT2Q9NQ03 307 aa9.68□□□□□ -0.86
IRF3-224ENST00000599680 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
IRF3-224ENST00000599680 DYNC1H1Q14204 4646 aaKnown RBP9.68□□□□□ -0.86
IRF3-224ENST00000599680 A0A087WWC5 75 aa9.67□□□□□ -0.86
IRF3-224ENST00000599680 C1QBP02746 253 aa9.67□□□□□ -0.86
IRF3-224ENST00000599680 SULT1A2P50226 295 aa9.67□□□□□ -0.86
IRF3-224ENST00000599680 CCL20P78556 96 aa9.67□□□□□ -0.86
IRF3-224ENST00000599680 SLC51BQ86UW2 128 aa9.67□□□□□ -0.86
IRF3-224ENST00000599680 MLST8Q9BVC4 326 aa9.67□□□□□ -0.86
IRF3-224ENST00000599680 A0A087WTM6 91 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 CXCL1P09341 107 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 AKAP14Q86UN6 197 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
IRF3-224ENST00000599680 LINC00694P0DN24 101 aa9.65□□□□□ -0.86
IRF3-224ENST00000599680 RPL36AP83881 106 aaKnown RBP9.65□□□□□ -0.86
IRF3-224ENST00000599680 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
IRF3-224ENST00000599680 ZNF56Q15929 161 aa9.65□□□□□ -0.86
IRF3-224ENST00000599680 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
IRF3-224ENST00000599680 RPL36ALQ969Q0 106 aaKnown RBP9.65□□□□□ -0.86
IRF3-224ENST00000599680 DAZAP1Q96EP5 407 aaKnown RBP9.65□□□□□ -0.86
IRF3-224ENST00000599680 URGCP-MRPS24S4R325 110 aa9.65□□□□□ -0.86
IRF3-224ENST00000599680 hCG_2014768A0A024R1R8 64 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 PDE6DO43924 150 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 GNG4P50150 75 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 Q6ZNX1 250 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 KRTAP17-1Q9BYP8 105 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 Q9UF83 564 aa9.64□□□□□ -0.87
IRF3-224ENST00000599680 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 OR5AL1P0C617 328 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 SSTP61278 116 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 LAGE3Q14657 143 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 TOR2AQ5JU69 321 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.63□□□□□ -0.87
IRF3-224ENST00000599680 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
IRF3-224ENST00000599680 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 F5H697 171 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 SNAI2O43623 268 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 BCL2P10415 239 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
IRF3-224ENST00000599680 RAB4BP61018 213 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 KCNIP4Q6PIL6 250 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
IRF3-224ENST00000599680 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 TRAV8-3A0A0A6YYJ7 113 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
IRF3-224ENST00000599680 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
IRF3-224ENST00000599680 OR2D3Q8NGH3 330 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 SMIM12Q96EX1 92 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 AP1S3Q96PC3 154 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 SSBP4Q9BWG4 385 aaPredicted RBP9.61□□□□□ -0.87
IRF3-224ENST00000599680 BIN3Q9NQY0 253 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 VAX2Q9UIW0 290 aa9.61□□□□□ -0.87
IRF3-224ENST00000599680 A0A087WX48 190 aa9.6□□□□□ -0.87
IRF3-224ENST00000599680 XKRY2A2RUG3 117 aa9.6□□□□□ -0.87
IRF3-224ENST00000599680 DAZ4Q86SG3 579 aaKnown RBP9.6□□□□□ -0.87
IRF3-224ENST00000599680 Q8N3U1 123 aa9.6□□□□□ -0.87
IRF3-224ENST00000599680 DAZ3Q9NR90 486 aaKnown RBP9.6□□□□□ -0.87
IRF3-224ENST00000599680 P01737 135 aa9.59□□□□□ -0.87
IRF3-224ENST00000599680 UBE2D3P61077 147 aa9.59□□□□□ -0.87
IRF3-224ENST00000599680 UBE2D2P62837 147 aa9.59□□□□□ -0.87
IRF3-224ENST00000599680 C9orf62Q8N4C0 152 aa9.59□□□□□ -0.87
IRF3-224ENST00000599680 FER1L6-AS1Q8NA97 138 aa9.59□□□□□ -0.87
IRF3-224ENST00000599680 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 GZMBP10144 247 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 GCSHP23434 173 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 NIT1Q86X76 327 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 OR10G8Q8NGN5 311 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 NTN5Q8WTR8 489 aaPredicted RBP9.58□□□□□ -0.88
IRF3-224ENST00000599680 RMI2Q96E14 147 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 RYR1P21817 5038 aa9.58□□□□□ -0.88
IRF3-224ENST00000599680 MGPP08493 103 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 CACNG7P62955 275 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 ELOBQ15370 118 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 ALKAL2Q6UX46 152 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 Q8N1X5 172 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 NEXN-AS1Q8NBZ9 246 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
IRF3-224ENST00000599680 PCLOQ9Y6V0 5065 aa9.56□□□□□ -0.88
IRF3-224ENST00000599680 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
IRF3-224ENST00000599680 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
IRF3-224ENST00000599680 RBFOX3A6NFN3 312 aa9.56□□□□□ -0.88
IRF3-224ENST00000599680 TMEM262E9PQX1 116 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms