RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 ZFP82Q8N141 532 aa6.58□□□□□ -1.36
VRK3-215ENST00000599138 C14orf178Q8N769 122 aaPredicted RBP6.58□□□□□ -1.36
VRK3-215ENST00000599138 Q9UF83 564 aa6.58□□□□□ -1.36
VRK3-215ENST00000599138 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
VRK3-215ENST00000599138 RAB19A4D1S5 217 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 M0R381 172 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 NKX2-5P52952 324 aaPredicted RBP6.57□□□□□ -1.36
VRK3-215ENST00000599138 BLOC1S1P78537 153 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 LINC01556Q5JQF7 62 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 LELP1Q5T871 98 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 PRR27Q6MZM9 219 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 OR10AG1Q8NH19 301 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 ATP6V0E2Q8NHE4 81 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 MED9Q9NWA0 146 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 RYR1P21817 5038 aa6.57□□□□□ -1.36
VRK3-215ENST00000599138 TRAV9-2A0A087WT02 112 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 A0A087WWL8 130 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 EVI2AP22794 236 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 GNG4P50150 75 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 BOLA1Q9Y3E2 137 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
VRK3-215ENST00000599138 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 GAGE12JA6NER3 117 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 IGLC6P0CF74 106 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 GAGE1Q13065 139 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 GAGE4Q13068 117 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 GAGE5Q13069 117 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 GAGE13Q4V321 117 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 FAM74A4Q5TZK3 123 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 NFE4Q86UQ8 179 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 C10orf126Q8N4M7 172 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 MSRB1Q9NZV6 116 aa6.55□□□□□ -1.36
VRK3-215ENST00000599138 RBFOX3A6NFN3 312 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 TMEM250H0YL14 139 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 RPS20P60866 119 aaKnown RBP6.54□□□□□ -1.36
VRK3-215ENST00000599138 RAB4BP61018 213 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 OR10J3Q5JRS4 329 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 OR2D3Q8NGH3 330 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 OR10G8Q8NGN5 311 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 DAZAP1Q96EP5 407 aaKnown RBP6.54□□□□□ -1.36
VRK3-215ENST00000599138 BIN3Q9NQY0 253 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 KIF25-AS1Q9Y6Z4 181 aa6.54□□□□□ -1.36
VRK3-215ENST00000599138 MUC21A0A0G2JKD1 596 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 MUC21A0A140T8X8 626 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 IBA57-AS1B1ANH7 110 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 NDUFS6O75380 124 aaKnown RBP6.53□□□□□ -1.36
VRK3-215ENST00000599138 GZMBP10144 247 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 SPANXN1Q5VSR9 72 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 FER1L6-AS1Q8NA97 138 aa6.53□□□□□ -1.36
VRK3-215ENST00000599138 HSPG2P98160 4391 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 A0A087WWC5 75 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 K7EN84 100 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 P01737 135 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 UBE2D3P61077 147 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 UBE2D2P62837 147 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 NUDT10Q8NFP7 164 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 OCC1Q8TAD7 63 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 NUDT11Q96G61 164 aa6.52□□□□□ -1.37
VRK3-215ENST00000599138 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
VRK3-215ENST00000599138 XKRY2A2RUG3 117 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 F2Z2F3 143 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 CACNG7P62955 275 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 RPL36AP83881 106 aaKnown RBP6.51□□□□□ -1.37
VRK3-215ENST00000599138 WDR73Q6P4I2 378 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 NEXN-AS1Q8NBZ9 246 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 RPL36ALQ969Q0 106 aaKnown RBP6.51□□□□□ -1.37
VRK3-215ENST00000599138 AP1S3Q96PC3 154 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 CNFNQ9BYD5 112 aa6.51□□□□□ -1.37
VRK3-215ENST00000599138 A0A087WTM6 91 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 CTRLP40313 264 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 ERVFC1-1P60608 527 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 LAGE3Q14657 143 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 ZNF56Q15929 161 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 NIT1Q86X76 327 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 Q8N3U1 123 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 FAM210AQ96ND0 272 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 TPPP3Q9BW30 176 aa6.5□□□□□ -1.37
VRK3-215ENST00000599138 RNASE7Q9H1E1 156 aaKnown RBP6.5□□□□□ -1.37
VRK3-215ENST00000599138 SSTP61278 116 aa6.49□□□□□ -1.37
VRK3-215ENST00000599138 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
VRK3-215ENST00000599138 FAM231DQ6ZW35 169 aa6.49□□□□□ -1.37
VRK3-215ENST00000599138 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
VRK3-215ENST00000599138 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 F5H697 171 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 M0QY20 66 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 EREGO14944 169 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 CDK2AP2O75956 126 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms