RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SNAI2O43623 268 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 GZMBP10144 247 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 ASIPP42127 132 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 TCL1AP56279 114 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 GTSF1Q8WW33 167 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 GFRA4Q9GZZ7 299 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
SHKBP1-218ENST00000598907 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 OR5AL1P0C617 328 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 SPART-AS1P0CW21 52 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 XGP55808 180 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 ZNF415Q09FC8 603 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 PTH2Q96A98 100 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 SPXQ9BT56 116 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
SHKBP1-218ENST00000598907 A0A1W2PPQ1 181 aa9.68□□□□□ -0.86
SHKBP1-218ENST00000598907 SMR3BP02814 79 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-218ENST00000598907 FAM3BP58499 235 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-218ENST00000598907 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-218ENST00000598907 ATRAIDQ6UW56 229 aa9.68□□□□□ -0.86
SHKBP1-218ENST00000598907 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
SHKBP1-218ENST00000598907 H3BVH4 76 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 S100A1P23297 94 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 S100A4P26447 101 aaKnown RBP9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 CTRLP40313 264 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 FER1L6-AS1Q8NA97 138 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 RPS10P5Q9NQ39 176 aa9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 TIMM8BQ9Y5J9 83 aaPredicted RBP9.67□□□□□ -0.86
SHKBP1-218ENST00000598907 SNURFLB1AK76 121 aa9.66□□□□□ -0.86
SHKBP1-218ENST00000598907 F2Z2F3 143 aa9.66□□□□□ -0.86
SHKBP1-218ENST00000598907 SPINK4O60575 86 aa9.66□□□□□ -0.86
SHKBP1-218ENST00000598907 WDR73Q6P4I2 378 aa9.66□□□□□ -0.86
SHKBP1-218ENST00000598907 LYZL1Q6UWQ5 148 aa9.66□□□□□ -0.86
SHKBP1-218ENST00000598907 LINC00612Q8N6U2 182 aa9.66□□□□□ -0.86
SHKBP1-218ENST00000598907 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 M0R2P5 195 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 NXPH4O95158 308 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 PIK3CD-AS1Q5SR53 167 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 SYT8Q8NBV8 401 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 RASL10AQ92737 203 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 NAT8BQ9UHF3 227 aa9.65□□□□□ -0.86
SHKBP1-218ENST00000598907 LYRM9A8MSI8 78 aa9.64□□□□□ -0.87
SHKBP1-218ENST00000598907 OR10AG1Q8NH19 301 aa9.64□□□□□ -0.87
SHKBP1-218ENST00000598907 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
SHKBP1-218ENST00000598907 DKK2Q9UBU2 259 aa9.64□□□□□ -0.87
SHKBP1-218ENST00000598907 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
SHKBP1-218ENST00000598907 CACNG7P62955 275 aa9.63□□□□□ -0.87
SHKBP1-218ENST00000598907 HAMPP81172 84 aa9.63□□□□□ -0.87
SHKBP1-218ENST00000598907 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
SHKBP1-218ENST00000598907 Q6ZSN1 163 aa9.63□□□□□ -0.87
SHKBP1-218ENST00000598907 ZNF876PQ49A33 203 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 Q6ZTI0 123 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 ZFP82Q8N141 532 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 C15orf53Q8NAA6 179 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 KRTAP1-5Q9BYS1 174 aa9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 MRPL16Q9NX20 251 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-218ENST00000598907 TRAV9-1A0A075B6T8 112 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 MUC21A0A0G2JKD1 596 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 MUC21A0A140T8X8 626 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 NUDT3O95989 172 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 NTF3P20783 257 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 SPANXN1Q5VSR9 72 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 YPEL4Q96NS1 127 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 MSRB1Q9NZV6 116 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 PLA2G2DQ9UNK4 145 aa9.61□□□□□ -0.87
SHKBP1-218ENST00000598907 TRGV1A0A0A0MS02 117 aa9.6□□□□□ -0.87
SHKBP1-218ENST00000598907 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
SHKBP1-218ENST00000598907 M0R381 172 aa9.6□□□□□ -0.87
SHKBP1-218ENST00000598907 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
SHKBP1-218ENST00000598907 RS1O15537 224 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 BTF3P20290 206 aaKnown RBP9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 S100PP25815 95 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 RIGQ13278 110 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 ELOBQ15370 118 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 ATP5L2Q7Z4Y8 100 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 BTF3L4Q96K17 158 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 SMCO4Q9NRQ5 59 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 LINC00588Q9Y4M8 146 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 KIF25-AS1Q9Y6Z4 181 aa9.59□□□□□ -0.87
SHKBP1-218ENST00000598907 A0A1B0GW15 77 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 A8MWV9 139 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 GAGE7O76087 117 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 CRYGDP07320 174 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
SHKBP1-218ENST00000598907 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms