RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 C14orf178Q8N769 122 aaPredicted RBP14.36□□□□□ -0.11
PNKP-209ENST00000596726 RBFOX3A6NFN3 312 aa14.35□□□□□ -0.11
PNKP-209ENST00000596726 LINC00694P0DN24 101 aa14.35□□□□□ -0.11
PNKP-209ENST00000596726 OR10AG1Q8NH19 301 aa14.35□□□□□ -0.11
PNKP-209ENST00000596726 Q9UF83 564 aa14.35□□□□□ -0.11
PNKP-209ENST00000596726 DYNC1H1Q14204 4646 aaKnown RBP14.34□□□□□ -0.11
PNKP-209ENST00000596726 A0A087WWL8 130 aa14.34□□□□□ -0.11
PNKP-209ENST00000596726 DNAH10OSP0CZ25 163 aa14.34□□□□□ -0.11
PNKP-209ENST00000596726 FAM74A4Q5TZK3 123 aa14.34□□□□□ -0.11
PNKP-209ENST00000596726 DAZAP1Q96EP5 407 aaKnown RBP14.34□□□□□ -0.11
PNKP-209ENST00000596726 LY96Q9Y6Y9 160 aa14.34□□□□□ -0.11
PNKP-209ENST00000596726 LINC00315P59091 139 aa14.33□□□□□ -0.12
PNKP-209ENST00000596726 ATP6V0E2Q8NHE4 81 aa14.33□□□□□ -0.12
PNKP-209ENST00000596726 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
PNKP-209ENST00000596726 BIN3Q9NQY0 253 aa14.33□□□□□ -0.12
PNKP-209ENST00000596726 GAGE12JA6NER3 117 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 TMEM250H0YL14 139 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 K7EP13 123 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 IGLC6P0CF74 106 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 RPS20P60866 119 aaKnown RBP14.32□□□□□ -0.12
PNKP-209ENST00000596726 GAGE1Q13065 139 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 GAGE4Q13068 117 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 GAGE5Q13069 117 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 GAGE13Q4V321 117 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 OR2D3Q8NGH3 330 aa14.32□□□□□ -0.12
PNKP-209ENST00000596726 TRAV9-2A0A087WT02 112 aa14.31□□□□□ -0.12
PNKP-209ENST00000596726 LELP1Q5T871 98 aa14.31□□□□□ -0.12
PNKP-209ENST00000596726 Q6ZRN7 208 aaPredicted RBP14.31□□□□□ -0.12
PNKP-209ENST00000596726 GZMBP10144 247 aa14.3□□□□□ -0.12
PNKP-209ENST00000596726 SPANXN1Q5VSR9 72 aa14.3□□□□□ -0.12
PNKP-209ENST00000596726 OCC1Q8TAD7 63 aa14.3□□□□□ -0.12
PNKP-209ENST00000596726 MUC21A0A0G2JKD1 596 aa14.29□□□□□ -0.12
PNKP-209ENST00000596726 MUC21A0A140T8X8 626 aa14.29□□□□□ -0.12
PNKP-209ENST00000596726 NDUFS6O75380 124 aaKnown RBP14.29□□□□□ -0.12
PNKP-209ENST00000596726 P01737 135 aa14.29□□□□□ -0.12
PNKP-209ENST00000596726 EVI2AP22794 236 aa14.29□□□□□ -0.12
PNKP-209ENST00000596726 TRAV8-6A0A0B4J262 113 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 IGHV3-38A0A0C4DH36 116 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 TRBV10-1A0A0K0K1A3 114 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 K7EN84 100 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 TOR2AQ5JU69 321 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 FER1L6-AS1Q8NA97 138 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 NUDT10Q8NFP7 164 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 NUDT11Q96G61 164 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 TNFRSF18Q9Y5U5 241 aa14.28□□□□□ -0.12
PNKP-209ENST00000596726 RAB4BP61018 213 aa14.27□□□□□ -0.13
PNKP-209ENST00000596726 LINC01556Q5JQF7 62 aa14.27□□□□□ -0.13
PNKP-209ENST00000596726 OR10J3Q5JRS4 329 aa14.27□□□□□ -0.13
PNKP-209ENST00000596726 FAM210AQ96ND0 272 aa14.27□□□□□ -0.13
PNKP-209ENST00000596726 KIF25-AS1Q9Y6Z4 181 aa14.27□□□□□ -0.13
PNKP-209ENST00000596726 XKRY2A2RUG3 117 aa14.26□□□□□ -0.13
PNKP-209ENST00000596726 SSTP61278 116 aa14.25□□□□□ -0.13
PNKP-209ENST00000596726 C10orf126Q8N4M7 172 aa14.25□□□□□ -0.13
PNKP-209ENST00000596726 OR10G8Q8NGN5 311 aa14.25□□□□□ -0.13
PNKP-209ENST00000596726 EIF5A2Q9GZV4 153 aaKnown RBP14.25□□□□□ -0.13
PNKP-209ENST00000596726 F2Z2F3 143 aa14.24□□□□□ -0.13
PNKP-209ENST00000596726 CACNG7P62955 275 aa14.24□□□□□ -0.13
PNKP-209ENST00000596726 TEX261Q6UWH6 196 aa14.24□□□□□ -0.13
PNKP-209ENST00000596726 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
PNKP-209ENST00000596726 TPPP3Q9BW30 176 aa14.24□□□□□ -0.13
PNKP-209ENST00000596726 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
PNKP-209ENST00000596726 MSRB1Q9NZV6 116 aa14.24□□□□□ -0.13
PNKP-209ENST00000596726 UBE2D3P61077 147 aa14.23□□□□□ -0.13
PNKP-209ENST00000596726 UBE2D2P62837 147 aa14.23□□□□□ -0.13
PNKP-209ENST00000596726 RPL36AP83881 106 aaKnown RBP14.23□□□□□ -0.13
PNKP-209ENST00000596726 ZNF56Q15929 161 aa14.23□□□□□ -0.13
PNKP-209ENST00000596726 RPL36ALQ969Q0 106 aaKnown RBP14.23□□□□□ -0.13
PNKP-209ENST00000596726 AP1S3Q96PC3 154 aa14.23□□□□□ -0.13
PNKP-209ENST00000596726 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
PNKP-209ENST00000596726 TRBV7-3A0A075B6L6 115 aa14.22□□□□□ -0.13
PNKP-209ENST00000596726 A0A087WWC5 75 aa14.22□□□□□ -0.13
PNKP-209ENST00000596726 SRP19P09132 144 aaKnown RBP14.22□□□□□ -0.13
PNKP-209ENST00000596726 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
PNKP-209ENST00000596726 IBA57-AS1B1ANH7 110 aa14.21□□□□□ -0.13
PNKP-209ENST00000596726 CTRLP40313 264 aa14.21□□□□□ -0.13
PNKP-209ENST00000596726 CEBPGP53567 150 aa14.21□□□□□ -0.13
PNKP-209ENST00000596726 WDR73Q6P4I2 378 aa14.21□□□□□ -0.13
PNKP-209ENST00000596726 NEXN-AS1Q8NBZ9 246 aa14.21□□□□□ -0.13
PNKP-209ENST00000596726 KIAA1109Q2LD37 5005 aa14.2□□□□□ -0.14
PNKP-209ENST00000596726 SMIM17P0DL12 118 aa14.2□□□□□ -0.14
PNKP-209ENST00000596726 FAM231DQ6ZW35 169 aa14.2□□□□□ -0.14
PNKP-209ENST00000596726 F5H697 171 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 IGHV3-30P01768 117 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 IGHV3-33P01772 117 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 IGHV3-30-3P0DP02 117 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 IGHV3-30-5P0DP03 117 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 SMIM7Q9BQ49 75 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 CNFNQ9BYD5 112 aa14.19□□□□□ -0.14
PNKP-209ENST00000596726 NTF3P20783 257 aa14.18□□□□□ -0.14
PNKP-209ENST00000596726 HERC2O95714 4834 aa14.18□□□□□ -0.14
PNKP-209ENST00000596726 GATCO43716 136 aaKnown RBP14.17□□□□□ -0.14
PNKP-209ENST00000596726 SPATA12Q7Z6I5 190 aa14.17□□□□□ -0.14
PNKP-209ENST00000596726 Q8N3U1 123 aa14.17□□□□□ -0.14
PNKP-209ENST00000596726 ZNF727A8MUV8 499 aa14.16□□□□□ -0.14
PNKP-209ENST00000596726 TRGC1P0CF51 173 aa14.16□□□□□ -0.14
PNKP-209ENST00000596726 LINC01551Q86U37 167 aa14.16□□□□□ -0.14
PNKP-209ENST00000596726 GTSF1Q8WW33 167 aa14.16□□□□□ -0.14
PNKP-209ENST00000596726 LRP1BQ9NZR2 4599 aa14.15□□□□□ -0.14
PNKP-209ENST00000596726 M0QY20 66 aa14.15□□□□□ -0.14
PNKP-209ENST00000596726 KRTAP10-2P60368 255 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms