RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 GAGE4Q13068 117 aa15.08■□□□□ 0
GTF2F1-204ENST00000594965 GAGE5Q13069 117 aa15.08■□□□□ 0
GTF2F1-204ENST00000594965 GAGE13Q4V321 117 aa15.08■□□□□ 0
GTF2F1-204ENST00000594965 LELP1Q5T871 98 aa15.08■□□□□ 0
GTF2F1-204ENST00000594965 FAM74A4Q5TZK3 123 aa15.08■□□□□ 0
GTF2F1-204ENST00000594965 ZFP82Q8N141 532 aa15.08■□□□□ 0
GTF2F1-204ENST00000594965 MEF2BQ02080 365 aaPredicted RBP15.07■□□□□ 0
GTF2F1-204ENST00000594965 SSBP4Q9BWG4 385 aaPredicted RBP15.07■□□□□ 0
GTF2F1-204ENST00000594965 MSRB1Q9NZV6 116 aa15.07■□□□□ 0
GTF2F1-204ENST00000594965 LRP1BQ9NZR2 4599 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 RAB19A4D1S5 217 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 SNAI2O43623 268 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 CENPWQ5EE01 88 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 LINC01556Q5JQF7 62 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 OR10J3Q5JRS4 329 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 OR10AG1Q8NH19 301 aa15.06■□□□□ 0
GTF2F1-204ENST00000594965 TRAV8-6A0A0B4J262 113 aa15.05■□□□□ -0
GTF2F1-204ENST00000594965 BCL2P10415 239 aa15.05■□□□□ -0
GTF2F1-204ENST00000594965 NFE4Q86UQ8 179 aa15.05■□□□□ -0
GTF2F1-204ENST00000594965 DNAH5Q8TE73 4624 aa15.04■□□□□ -0
GTF2F1-204ENST00000594965 C10orf126Q8N4M7 172 aa15.04■□□□□ -0
GTF2F1-204ENST00000594965 A0A1B0GVG6 124 aa15.03■□□□□ -0
GTF2F1-204ENST00000594965 PDE6DO43924 150 aa15.03■□□□□ -0
GTF2F1-204ENST00000594965 IFNA1P01562 189 aa15.03■□□□□ -0
GTF2F1-204ENST00000594965 OR5AL1P0C617 328 aa15.03■□□□□ -0
GTF2F1-204ENST00000594965 TRBV20OR9-2A0A075B6H5 130 aa15.02■□□□□ -0
GTF2F1-204ENST00000594965 MUC21A0A0G2JKD1 596 aa15.02■□□□□ -0
GTF2F1-204ENST00000594965 MUC21A0A140T8X8 626 aa15.02■□□□□ -0
GTF2F1-204ENST00000594965 VAX2Q9UIW0 290 aa15.02■□□□□ -0
GTF2F1-204ENST00000594965 RYR1P21817 5038 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 C19orf71A6NCJ1 209 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 IBA57-AS1B1ANH7 110 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 IGHV3-30P01768 117 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 IGHV3-33P01772 117 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 IGHV3-30-3P0DP02 117 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 IGHV3-30-5P0DP03 117 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 ALKAL2Q6UX46 152 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 MED9Q9NWA0 146 aa15.01□□□□□ -0.01
GTF2F1-204ENST00000594965 GNG4P50150 75 aa15□□□□□ -0.01
GTF2F1-204ENST00000594965 Q8N3U1 123 aa15□□□□□ -0.01
GTF2F1-204ENST00000594965 SMIM12Q96EX1 92 aa15□□□□□ -0.01
GTF2F1-204ENST00000594965 BOLA1Q9Y3E2 137 aa15□□□□□ -0.01
GTF2F1-204ENST00000594965 GZMBP10144 247 aa14.99□□□□□ -0.01
GTF2F1-204ENST00000594965 ERVFC1-1P60608 527 aa14.99□□□□□ -0.01
GTF2F1-204ENST00000594965 A0A087WTM6 91 aa14.98□□□□□ -0.01
GTF2F1-204ENST00000594965 NKX2-5P52952 324 aaPredicted RBP14.98□□□□□ -0.01
GTF2F1-204ENST00000594965 TRBV10-1A0A0K0K1A3 114 aa14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 IGLC6P0CF74 106 aa14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 FUSP35637 526 aaKnown RBP eCLIP14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 TAGLN2P37802 199 aaKnown RBP14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 RAB4BP61018 213 aa14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 SPANXN1Q5VSR9 72 aa14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 KIF25-AS1Q9Y6Z4 181 aa14.97□□□□□ -0.01
GTF2F1-204ENST00000594965 UBE2D3P61077 147 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 SSTP61278 116 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 UBE2D2P62837 147 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 OR2D3Q8NGH3 330 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 OR10G8Q8NGN5 311 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 LYPD6BQ8NI32 183 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 DAZAP1Q96EP5 407 aaKnown RBP14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 KRTAP17-1Q9BYP8 105 aa14.96□□□□□ -0.01
GTF2F1-204ENST00000594965 HSPG2P98160 4391 aa14.95□□□□□ -0.02
GTF2F1-204ENST00000594965 A0A087WWC5 75 aa14.95□□□□□ -0.02
GTF2F1-204ENST00000594965 RBFOX3A6NFN3 312 aa14.95□□□□□ -0.02
GTF2F1-204ENST00000594965 CDK2AP2O75956 126 aa14.95□□□□□ -0.02
GTF2F1-204ENST00000594965 BLOC1S1P78537 153 aa14.95□□□□□ -0.02
GTF2F1-204ENST00000594965 TRBV7-3A0A075B6L6 115 aa14.94□□□□□ -0.02
GTF2F1-204ENST00000594965 EREGO14944 169 aa14.94□□□□□ -0.02
GTF2F1-204ENST00000594965 RPS20P60866 119 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-204ENST00000594965 ZNF56Q15929 161 aa14.94□□□□□ -0.02
GTF2F1-204ENST00000594965 FER1L6-AS1Q8NA97 138 aa14.94□□□□□ -0.02
GTF2F1-204ENST00000594965 NEXN-AS1Q8NBZ9 246 aa14.94□□□□□ -0.02
GTF2F1-204ENST00000594965 APOBP04114 4563 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-204ENST00000594965 RPL36AP83881 106 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-204ENST00000594965 RPL36ALQ969Q0 106 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-204ENST00000594965 Q9HAA7 133 aa14.93□□□□□ -0.02
GTF2F1-204ENST00000594965 P01737 135 aa14.92□□□□□ -0.02
GTF2F1-204ENST00000594965 LAGE3Q14657 143 aa14.92□□□□□ -0.02
GTF2F1-204ENST00000594965 NUDT10Q8NFP7 164 aa14.92□□□□□ -0.02
GTF2F1-204ENST00000594965 NUDT11Q96G61 164 aa14.92□□□□□ -0.02
GTF2F1-204ENST00000594965 PGPEP1Q9NXJ5 209 aa14.92□□□□□ -0.02
GTF2F1-204ENST00000594965 LRCOL1A6NCL2 159 aa14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 K7EN84 100 aa14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 DAZ4Q86SG3 579 aaKnown RBP14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 OCC1Q8TAD7 63 aa14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 TPPP3Q9BW30 176 aa14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 BIN3Q9NQY0 253 aa14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 DAZ3Q9NR90 486 aaKnown RBP14.91□□□□□ -0.02
GTF2F1-204ENST00000594965 NIT1Q86X76 327 aa14.9□□□□□ -0.02
GTF2F1-204ENST00000594965 AP1S3Q96PC3 154 aa14.9□□□□□ -0.02
GTF2F1-204ENST00000594965 CACNG7P62955 275 aa14.89□□□□□ -0.03
GTF2F1-204ENST00000594965 CDPF1Q6NVV7 123 aa14.89□□□□□ -0.03
GTF2F1-204ENST00000594965 F5H697 171 aa14.88□□□□□ -0.03
GTF2F1-204ENST00000594965 TMEM250H0YL14 139 aa14.88□□□□□ -0.03
GTF2F1-204ENST00000594965 PSCAO43653 123 aa14.88□□□□□ -0.03
GTF2F1-204ENST00000594965 KRTAP4-5Q9BYR2 181 aa14.88□□□□□ -0.03
GTF2F1-204ENST00000594965 RNASE7Q9H1E1 156 aaKnown RBP14.88□□□□□ -0.03
GTF2F1-204ENST00000594965 XKRY2A2RUG3 117 aa14.87□□□□□ -0.03
GTF2F1-204ENST00000594965 SMIM17P0DL12 118 aa14.87□□□□□ -0.03
GTF2F1-204ENST00000594965 LYZL1Q6UWQ5 148 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms