RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SAMD10Q9BYL1 202 aa17.81■□□□□ 0.44
TRIM28-204ENST00000594806 HYDINQ4G0P3 5121 aa17.81■□□□□ 0.44
TRIM28-204ENST00000594806 GZMBP10144 247 aa17.8■□□□□ 0.44
TRIM28-204ENST00000594806 TMEM241Q24JQ0 296 aa17.8■□□□□ 0.44
TRIM28-204ENST00000594806 DNAH6Q9C0G6 4158 aa17.79■□□□□ 0.44
TRIM28-204ENST00000594806 GATCO43716 136 aaKnown RBP17.79■□□□□ 0.44
TRIM28-204ENST00000594806 ERVFC1-1P60608 527 aa17.79■□□□□ 0.44
TRIM28-204ENST00000594806 SRSF3P84103 164 aaKnown RBP17.79■□□□□ 0.44
TRIM28-204ENST00000594806 CLLU1Q5K131 121 aa17.79■□□□□ 0.44
TRIM28-204ENST00000594806 FAM74A4Q5TZK3 123 aa17.79■□□□□ 0.44
TRIM28-204ENST00000594806 WDR73Q6P4I2 378 aa17.79■□□□□ 0.44
TRIM28-204ENST00000594806 C9JQL5 133 aa17.78■□□□□ 0.44
TRIM28-204ENST00000594806 CT83Q5H943 113 aa17.78■□□□□ 0.44
TRIM28-204ENST00000594806 LYPD5Q6UWN5 251 aa17.78■□□□□ 0.44
TRIM28-204ENST00000594806 TPPP3Q9BW30 176 aa17.78■□□□□ 0.44
TRIM28-204ENST00000594806 A0A087WWL8 130 aa17.77■□□□□ 0.44
TRIM28-204ENST00000594806 A8MWL6 223 aa17.77■□□□□ 0.44
TRIM28-204ENST00000594806 LOC100131303A0A0U1RQF7 123 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 TIRAPP58753 221 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 SOHLH1Q5JUK2 328 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 Q6ZSN1 163 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 AP1S3Q96PC3 154 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 Q9H8V8 135 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 OSTCQ9NRP0 149 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 NAT8Q9UHE5 227 aa17.76■□□□□ 0.43
TRIM28-204ENST00000594806 SMIM17P0DL12 118 aa17.75■□□□□ 0.43
TRIM28-204ENST00000594806 CTRLP40313 264 aa17.75■□□□□ 0.43
TRIM28-204ENST00000594806 RAB4BP61018 213 aa17.75■□□□□ 0.43
TRIM28-204ENST00000594806 IFITM2Q01629 132 aa17.75■□□□□ 0.43
TRIM28-204ENST00000594806 LYZL1Q6UWQ5 148 aa17.75■□□□□ 0.43
TRIM28-204ENST00000594806 MUC21A0A0G2JKD1 596 aa17.74■□□□□ 0.43
TRIM28-204ENST00000594806 MUC21A0A140T8X8 626 aa17.74■□□□□ 0.43
TRIM28-204ENST00000594806 CNFNQ9BYD5 112 aa17.74■□□□□ 0.43
TRIM28-204ENST00000594806 IGLV2-18A0A075B6J9 118 aa17.73■□□□□ 0.43
TRIM28-204ENST00000594806 TRBV10-1A0A0K0K1A3 114 aa17.73■□□□□ 0.43
TRIM28-204ENST00000594806 Q6ZR54 194 aa17.73■□□□□ 0.43
TRIM28-204ENST00000594806 C15orf54Q8N8G6 183 aa17.73■□□□□ 0.43
TRIM28-204ENST00000594806 TRGC1P0CF51 173 aa17.72■□□□□ 0.43
TRIM28-204ENST00000594806 RPL23P62829 140 aaKnown RBP17.72■□□□□ 0.43
TRIM28-204ENST00000594806 FAM231BA6NCW3 169 aa17.71■□□□□ 0.43
TRIM28-204ENST00000594806 FOXA3P55318 350 aaPredicted RBP17.71■□□□□ 0.43
TRIM28-204ENST00000594806 SSTP61278 116 aa17.71■□□□□ 0.43
TRIM28-204ENST00000594806 C14orf178Q8N769 122 aaPredicted RBP17.71■□□□□ 0.43
TRIM28-204ENST00000594806 ISOC2Q96AB3 205 aa17.71■□□□□ 0.43
TRIM28-204ENST00000594806 NBDYA0A0U1RRE5 68 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 M0R2N4 97 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 NTF3P20783 257 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 ZNF56Q15929 161 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 TTC32Q5I0X7 151 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 ATP6V0E2Q8NHE4 81 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 GFRA4Q9GZZ7 299 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 KIF25-AS1Q9Y6Z4 181 aa17.7■□□□□ 0.42
TRIM28-204ENST00000594806 SIVA1O15304 175 aa17.69■□□□□ 0.42
TRIM28-204ENST00000594806 LINC00694P0DN24 101 aa17.69■□□□□ 0.42
TRIM28-204ENST00000594806 TSKUQ8WUA8 353 aa17.69■□□□□ 0.42
TRIM28-204ENST00000594806 GTSF1Q8WW33 167 aa17.69■□□□□ 0.42
TRIM28-204ENST00000594806 ADIRFQ15847 76 aa17.68■□□□□ 0.42
TRIM28-204ENST00000594806 GTSF1LQ9H1H1 148 aa17.68■□□□□ 0.42
TRIM28-204ENST00000594806 MSRB1Q9NZV6 116 aa17.68■□□□□ 0.42
TRIM28-204ENST00000594806 GAGE12JA6NER3 117 aa17.67■□□□□ 0.42
TRIM28-204ENST00000594806 GAGE1Q13065 139 aa17.67■□□□□ 0.42
TRIM28-204ENST00000594806 GAGE4Q13068 117 aa17.67■□□□□ 0.42
TRIM28-204ENST00000594806 GAGE5Q13069 117 aa17.67■□□□□ 0.42
TRIM28-204ENST00000594806 GAGE13Q4V321 117 aa17.67■□□□□ 0.42
TRIM28-204ENST00000594806 F5H697 171 aa17.66■□□□□ 0.42
TRIM28-204ENST00000594806 LINC00315P59091 139 aa17.66■□□□□ 0.42
TRIM28-204ENST00000594806 RPL36AP83881 106 aaKnown RBP17.66■□□□□ 0.42
TRIM28-204ENST00000594806 TWIST1Q15672 202 aa17.66■□□□□ 0.42
TRIM28-204ENST00000594806 OR10G8Q8NGN5 311 aa17.66■□□□□ 0.42
TRIM28-204ENST00000594806 RPL36ALQ969Q0 106 aaKnown RBP17.66■□□□□ 0.42
TRIM28-204ENST00000594806 BTF3P20290 206 aaKnown RBP17.65■□□□□ 0.42
TRIM28-204ENST00000594806 BORCS7Q96B45 105 aa17.65■□□□□ 0.42
TRIM28-204ENST00000594806 DPH3P1Q9H4G8 78 aa17.65■□□□□ 0.42
TRIM28-204ENST00000594806 V9GYV3 84 aa17.65■□□□□ 0.42
TRIM28-204ENST00000594806 TRBV7-3A0A075B6L6 115 aa17.64■□□□□ 0.41
TRIM28-204ENST00000594806 K7EP13 123 aa17.64■□□□□ 0.41
TRIM28-204ENST00000594806 TRAV8-6A0A0B4J262 113 aa17.63■□□□□ 0.41
TRIM28-204ENST00000594806 H7C1H1 209 aa17.63■□□□□ 0.41
TRIM28-204ENST00000594806 EVI2AP22794 236 aa17.63■□□□□ 0.41
TRIM28-204ENST00000594806 LELP1Q5T871 98 aa17.63■□□□□ 0.41
TRIM28-204ENST00000594806 UQCC3Q6UW78 93 aa17.63■□□□□ 0.41
TRIM28-204ENST00000594806 SMIM15Q7Z3B0 74 aa17.63■□□□□ 0.41
TRIM28-204ENST00000594806 A0A087WWC5 75 aa17.62■□□□□ 0.41
TRIM28-204ENST00000594806 HIGD1CA8MV81 97 aa17.62■□□□□ 0.41
TRIM28-204ENST00000594806 C1orf134Q5TEV5 83 aa17.62■□□□□ 0.41
TRIM28-204ENST00000594806 LINC00336Q6ZUF6 198 aa17.62■□□□□ 0.41
TRIM28-204ENST00000594806 PGLYRP4Q96LB8 373 aa17.62■□□□□ 0.41
TRIM28-204ENST00000594806 Q9UF83 564 aa17.62■□□□□ 0.41
TRIM28-204ENST00000594806 TRAV9-2A0A087WT02 112 aa17.61■□□□□ 0.41
TRIM28-204ENST00000594806 MGPP08493 103 aa17.61■□□□□ 0.41
TRIM28-204ENST00000594806 UBE2D3P61077 147 aa17.6■□□□□ 0.41
TRIM28-204ENST00000594806 UBE2D2P62837 147 aa17.6■□□□□ 0.41
TRIM28-204ENST00000594806 PNRC1Q12796 327 aaPredicted RBP17.6■□□□□ 0.41
TRIM28-204ENST00000594806 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.6■□□□□ 0.41
TRIM28-204ENST00000594806 NEXN-AS1Q8NBZ9 246 aa17.6■□□□□ 0.41
TRIM28-204ENST00000594806 A0A1B0GUT8 65 aa17.59■□□□□ 0.41
TRIM28-204ENST00000594806 DNAH10OSP0CZ25 163 aa17.59■□□□□ 0.41
TRIM28-204ENST00000594806 OR10J3Q5JRS4 329 aa17.59■□□□□ 0.41
TRIM28-204ENST00000594806 DNAJC30Q96LL9 226 aa17.59■□□□□ 0.41
TRIM28-204ENST00000594806 WFDC10BQ8IUB3 73 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms