RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 J3QQQ9 107 aa13.4□□□□□ -0.26
H3F3B-211ENST00000591893 IGHV3-33P01772 117 aa13.4□□□□□ -0.26
H3F3B-211ENST00000591893 NDUFV3P56181 108 aaKnown RBP13.4□□□□□ -0.26
H3F3B-211ENST00000591893 RPL39P62891 51 aaKnown RBP13.4□□□□□ -0.26
H3F3B-211ENST00000591893 UTP20O75691 2785 aaKnown RBP13.4□□□□□ -0.26
H3F3B-211ENST00000591893 MED14OSP0DP75 135 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 KLK9Q2XQG4 91 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 ZNRF2Q8NHG8 242 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 EEF1AKMT3Q96AZ1 226 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 TMEM141Q96I45 108 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 KLK9Q9UKQ9 250 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 CACNA1BQ00975 2339 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 TRAV4A0A0B4J268 109 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 LGALS3P17931 250 aaKnown RBP13.39□□□□□ -0.27
H3F3B-211ENST00000591893 ACACBO00763 2458 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 CRYBG3Q68DQ2 2970 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 CSMD2Q7Z408 3487 aa13.39□□□□□ -0.27
H3F3B-211ENST00000591893 PKD1L2Q7Z442 2459 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 CACNA1AO00555 2505 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 CELSR1Q9NYQ6 3014 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 G3V318 75 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 GNRH2O43555 120 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 EIF4EBP3O60516 100 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-211ENST00000591893 IGF2-ASQ6U949 168 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 OR10J6PQ8NGY7 276 aa13.38□□□□□ -0.27
H3F3B-211ENST00000591893 NTN5Q8WTR8 489 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-211ENST00000591893 H7C2G1 150 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 CRLF1O75462 422 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
H3F3B-211ENST00000591893 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
H3F3B-211ENST00000591893 MINOS1Q5TGZ0 78 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 POM121L12Q8N7R1 296 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 TMEM263Q8WUH6 116 aaKnown RBP13.37□□□□□ -0.27
H3F3B-211ENST00000591893 TIMM17AQ99595 171 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 MINOS1-NBL1R4GNA1 71 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 SPG11Q96JI7 2443 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 HRNRQ86YZ3 2850 aaPredicted RBP13.37□□□□□ -0.27
H3F3B-211ENST00000591893 ZNF876PQ49A33 203 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 Q8N1Y9 231 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 CFAP46Q8IYW2 2715 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 TRBV7-1A0A0A6YYK4 115 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 P0DMU3 169 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
H3F3B-211ENST00000591893 POLR2KP53803 58 aaKnown RBP13.37□□□□□ -0.27
H3F3B-211ENST00000591893 ZFHX3Q15911 3703 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 IGHV4OR15-8A0A075B7B6 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 A0A087WW49 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
H3F3B-211ENST00000591893 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 Q8NA96 180 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 MUC4Q99102 2169 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 GAGE7O76087 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 GAGE12FP0CL80 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 GAGE12GP0CL81 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 GAGE12IP0CL82 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 LINC00315P59091 139 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 DEFB1P60022 68 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 GAGE4Q13068 117 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 LINC01560Q8TB33 94 aa13.36□□□□□ -0.27
H3F3B-211ENST00000591893 A0A0B4J2C4 111 aa13.35□□□□□ -0.27
H3F3B-211ENST00000591893 KIF25-AS1Q9Y6Z4 181 aa13.35□□□□□ -0.27
H3F3B-211ENST00000591893 FLNCQ14315 2725 aa13.35□□□□□ -0.27
H3F3B-211ENST00000591893 OVOL1O14753 267 aa13.35□□□□□ -0.27
H3F3B-211ENST00000591893 IFITM1P13164 125 aa13.35□□□□□ -0.27
H3F3B-211ENST00000591893 TRAV2A0A0B4J234 112 aa13.34□□□□□ -0.27
H3F3B-211ENST00000591893 VCYO14598 125 aa13.34□□□□□ -0.27
H3F3B-211ENST00000591893 CCDC179H3BU77 68 aa13.34□□□□□ -0.27
H3F3B-211ENST00000591893 ATXN8Q156A1 80 aa13.34□□□□□ -0.27
H3F3B-211ENST00000591893 LINC01620Q4KN68 170 aa13.34□□□□□ -0.27
H3F3B-211ENST00000591893 Q1RN00 199 aa13.33□□□□□ -0.27
H3F3B-211ENST00000591893 C1orf122Q6ZSJ8 110 aa13.33□□□□□ -0.27
H3F3B-211ENST00000591893 NXPH4O95158 308 aa13.33□□□□□ -0.28
H3F3B-211ENST00000591893 ELANEP08246 267 aa13.33□□□□□ -0.28
H3F3B-211ENST00000591893 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
H3F3B-211ENST00000591893 Q6Q795 121 aa13.33□□□□□ -0.28
H3F3B-211ENST00000591893 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
H3F3B-211ENST00000591893 HIVEP3Q5T1R4 2406 aa13.33□□□□□ -0.28
H3F3B-211ENST00000591893 LEPROTO15243 131 aa13.32□□□□□ -0.28
H3F3B-211ENST00000591893 TRAV8-4A0A0B4J246 113 aa13.32□□□□□ -0.28
H3F3B-211ENST00000591893 TEX49A0A1B0GTD5 131 aa13.32□□□□□ -0.28
H3F3B-211ENST00000591893 SDHAF1A6NFY7 115 aa13.32□□□□□ -0.28
H3F3B-211ENST00000591893 IGHV4-39P01824 125 aa13.32□□□□□ -0.28
H3F3B-211ENST00000591893 JPT2Q9H910 190 aa13.32□□□□□ -0.28
H3F3B-211ENST00000591893 RPL13AP40429 203 aaKnown RBP13.31□□□□□ -0.28
H3F3B-211ENST00000591893 FAM19A4Q96LR4 140 aa13.31□□□□□ -0.28
H3F3B-211ENST00000591893 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
H3F3B-211ENST00000591893 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-211ENST00000591893 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 LINC01600Q96MT4 127 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 F5H697 171 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 F6UB75 175 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 SOCS3O14543 225 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 APRG1Q8IVJ8 170 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 C15orf53Q8NAA6 179 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 MYO18BQ8IUG5 2567 aa13.3□□□□□ -0.28
H3F3B-211ENST00000591893 A0A087WWL8 130 aa13.29□□□□□ -0.28
H3F3B-211ENST00000591893 TRBV10-2A0A0K0K1G8 114 aa13.29□□□□□ -0.28
H3F3B-211ENST00000591893 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms