RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 MINOS1-NBL1R4GNA1 71 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 TRAV12-3A0A0B4J271 114 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 A4D1N5 150 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
LINC01140-210ENST00000590653 EBI3Q14213 229 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 PMVKQ15126 192 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 LYRM7Q5U5X0 104 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 PRO1854Q9UHT4 67 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 TRBV7-1A0A0A6YYK4 115 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 SDHAF1A6NFY7 115 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 PRSS2P07478 247 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 UBE2D3P61077 147 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 UBE2D2P62837 147 aa8.24□□□□□ -1.09
LINC01140-210ENST00000590653 J3QQQ9 107 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 ZNF688P0C7X2 276 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 CHD8Q9HCK8 2581 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 SLC25A20O43772 301 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 HTN1P15515 57 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 EDN2P20800 178 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 NPC2P61916 151 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 SUMO4Q6EEV6 95 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 FAM159AQ6UWV7 190 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 PF4V1P10720 104 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 ZNF56Q15929 161 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 ZNF580Q9UK33 172 aa8.23□□□□□ -1.09
LINC01140-210ENST00000590653 CUBNO60494 3623 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 CENPVL3A0A0U1RRI6 287 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 OOSP1A8MZH6 123 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 LINC01619G3V211 115 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 IGF2-ASQ6U949 168 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 ATP6V0E2Q8NHE4 81 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 TRAV12-2A0A075B6T6 113 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 B5MCH6 92 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 FOXC1Q12948 553 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 MRPL53Q96EL3 112 aaKnown RBP8.22□□□□□ -1.09
LINC01140-210ENST00000590653 SIRPDQ9H106 197 aa8.22□□□□□ -1.09
LINC01140-210ENST00000590653 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.09
LINC01140-210ENST00000590653 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.09
LINC01140-210ENST00000590653 ITLN2Q8WWU7 325 aaPredicted RBP8.21□□□□□ -1.09
LINC01140-210ENST00000590653 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 SLC25A29Q8N8R3 303 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 VCYO14598 125 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 OVOL1O14753 267 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 UBE2E1P51965 193 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 TCF15Q12870 199 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.1
LINC01140-210ENST00000590653 MUSTN1Q8IVN3 82 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 U3KQE9 123 aa8.21□□□□□ -1.1
LINC01140-210ENST00000590653 ELANEP08246 267 aa8.2□□□□□ -1.1
LINC01140-210ENST00000590653 RHPN1-AS1Q9BWJ2 59 aa8.2□□□□□ -1.1
LINC01140-210ENST00000590653 BPESC1Q9GZL8 116 aa8.2□□□□□ -1.1
LINC01140-210ENST00000590653 C5orf56Q8N8D9 126 aa8.2□□□□□ -1.1
LINC01140-210ENST00000590653 SPXQ9BT56 116 aa8.2□□□□□ -1.1
LINC01140-210ENST00000590653 IGHV3-73A0A0B4J1V6 119 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 A0A1W2PPR1 153 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 NPFFO15130 113 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 AJUBAQ96IF1 538 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 A0A0J9YXV3 536 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 KLK9Q9UKQ9 250 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 PPP1R17O96001 155 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 LINC00315P59091 139 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
LINC01140-210ENST00000590653 PRRC2AP48634 2157 aaKnown RBP8.19□□□□□ -1.1
LINC01140-210ENST00000590653 USP9YO00507 2555 aaPredicted RBP8.18□□□□□ -1.1
LINC01140-210ENST00000590653 TEX49A0A1B0GTD5 131 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 CRLF1O75462 422 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 SPTBN4Q9H254 2564 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 CRYBG3Q68DQ2 2970 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 TRAV4A0A0B4J268 109 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 SNCGO76070 127 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
LINC01140-210ENST00000590653 GAGE2BQ13066 116 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
LINC01140-210ENST00000590653 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
LINC01140-210ENST00000590653 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
LINC01140-210ENST00000590653 CEMP1Q6PRD7 247 aaPredicted RBP8.17□□□□□ -1.1
LINC01140-210ENST00000590653 Q6ZSV7 163 aa8.17□□□□□ -1.1
LINC01140-210ENST00000590653 KIF25-AS1Q9Y6Z4 181 aa8.17□□□□□ -1.1
LINC01140-210ENST00000590653 BLCAPP62952 87 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 ZNF876PQ49A33 203 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 Q8N1Y9 231 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 TRAV8-3A0A0A6YYJ7 113 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 IGHV1-69DA0A0B4J2H0 117 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 A8MZ25 164 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 ADORA2A-AS1P86434 159 aa8.16□□□□□ -1.1
LINC01140-210ENST00000590653 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms