RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
GCDH-213ENST00000590627 URGCP-MRPS24S4R325 110 aa11.78□□□□□ -0.52
GCDH-213ENST00000590627 A0A1B0GXF2 115 aa11.77□□□□□ -0.53
GCDH-213ENST00000590627 ELOBQ15370 118 aa11.77□□□□□ -0.53
GCDH-213ENST00000590627 TWIST1Q15672 202 aa11.77□□□□□ -0.53
GCDH-213ENST00000590627 TMEM88Q6PEY1 159 aa11.77□□□□□ -0.53
GCDH-213ENST00000590627 CBLN2Q8IUK8 224 aa11.77□□□□□ -0.53
GCDH-213ENST00000590627 MSRB1Q9NZV6 116 aa11.77□□□□□ -0.53
GCDH-213ENST00000590627 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
GCDH-213ENST00000590627 A8MWV9 139 aa11.76□□□□□ -0.53
GCDH-213ENST00000590627 CELA1Q9UNI1 258 aa11.76□□□□□ -0.53
GCDH-213ENST00000590627 RS1O15537 224 aa11.75□□□□□ -0.53
GCDH-213ENST00000590627 S100A8P05109 93 aa11.75□□□□□ -0.53
GCDH-213ENST00000590627 MRPL54Q6P161 138 aaKnown RBP11.75□□□□□ -0.53
GCDH-213ENST00000590627 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
GCDH-213ENST00000590627 DNAH10Q8IVF4 4471 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 GAGE12BA1L429 117 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 SCO1O75880 301 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 GAGE7O76087 117 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 SSTP61278 116 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 HBBP68871 147 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 POM121L12Q8N7R1 296 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 GATD1Q8NB37 220 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
GCDH-213ENST00000590627 TRGV2A0A075B6R0 118 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 TGIF2-C20orf24A0A0A6YYL0 155 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 CIDEAO60543 219 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 DEFB130BP0DP73 79 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 DEFB130AP0DP74 79 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 DAD1P61803 113 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 JPT2Q9H910 190 aa11.73□□□□□ -0.53
GCDH-213ENST00000590627 CRYGDP07320 174 aa11.72□□□□□ -0.53
GCDH-213ENST00000590627 C12orf74Q32Q52 190 aa11.72□□□□□ -0.53
GCDH-213ENST00000590627 UFSP1Q6NVU6 142 aa11.72□□□□□ -0.53
GCDH-213ENST00000590627 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
GCDH-213ENST00000590627 TMEM191AQ9H0A3 160 aa11.72□□□□□ -0.53
GCDH-213ENST00000590627 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
GCDH-213ENST00000590627 RHODO00212 210 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 EVI2AP22794 236 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 CAMPP49913 170 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 LINC00315P59091 139 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 COX19Q49B96 90 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 SMIM15Q7Z3B0 74 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 C14orf178Q8N769 122 aaPredicted RBP11.71□□□□□ -0.53
GCDH-213ENST00000590627 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
GCDH-213ENST00000590627 SAMD10Q9BYL1 202 aa11.71□□□□□ -0.53
GCDH-213ENST00000590627 FAM210BQ96KR6 192 aa11.7□□□□□ -0.54
GCDH-213ENST00000590627 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
GCDH-213ENST00000590627 A0A087WWL8 130 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 COLCA2A8K830 154 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 TMEM136Q6ZRR5 245 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 ZNF479Q96JC4 524 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 GNB1LQ9BYB4 327 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 VPS13DQ5THJ4 4388 aa11.69□□□□□ -0.54
GCDH-213ENST00000590627 FAM104BQ5XKR9 115 aa11.68□□□□□ -0.54
GCDH-213ENST00000590627 IGHV3-53P01767 116 aa11.67□□□□□ -0.54
GCDH-213ENST00000590627 ATP5G1P05496 136 aa11.67□□□□□ -0.54
GCDH-213ENST00000590627 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
GCDH-213ENST00000590627 FAM74A4Q5TZK3 123 aa11.67□□□□□ -0.54
GCDH-213ENST00000590627 FRZBQ92765 325 aa11.67□□□□□ -0.54
GCDH-213ENST00000590627 HERC2O95714 4834 aa11.67□□□□□ -0.54
GCDH-213ENST00000590627 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 MT-ND6P03923 174 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 RAB4BP61018 213 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 FHL2Q14192 279 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 Q6ZTC4 211 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
GCDH-213ENST00000590627 DNAH6Q9C0G6 4158 aa11.65□□□□□ -0.54
GCDH-213ENST00000590627 NACAE9PAV3 2078 aa11.65□□□□□ -0.54
GCDH-213ENST00000590627 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.54
GCDH-213ENST00000590627 RAB4AP20338 218 aa11.65□□□□□ -0.54
GCDH-213ENST00000590627 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
GCDH-213ENST00000590627 IGHV3-73A0A0B4J1V6 119 aa11.64□□□□□ -0.55
GCDH-213ENST00000590627 HOXA5P20719 270 aa11.64□□□□□ -0.55
GCDH-213ENST00000590627 TCTAP57738 103 aa11.64□□□□□ -0.55
GCDH-213ENST00000590627 SLAQ13239 276 aa11.64□□□□□ -0.55
GCDH-213ENST00000590627 TRGV4A0A0C4DH28 118 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 MGPP08493 103 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 RAB5AP20339 215 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 ZNF56Q15929 161 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 MRPL51Q4U2R6 128 aaKnown RBP11.63□□□□□ -0.55
GCDH-213ENST00000590627 Q6ZSN1 163 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
GCDH-213ENST00000590627 F5H697 171 aa11.62□□□□□ -0.55
GCDH-213ENST00000590627 APCSP02743 223 aa11.62□□□□□ -0.55
GCDH-213ENST00000590627 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
GCDH-213ENST00000590627 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
GCDH-213ENST00000590627 PRO0255Q9UI72 69 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms