RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 CRYGDP07320 174 aa12.9□□□□□ -0.34
ERCC1-207ENST00000588738 EPPK1P58107 5090 aaKnown RBP12.9□□□□□ -0.35
ERCC1-207ENST00000588738 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
ERCC1-207ENST00000588738 GZMBP10144 247 aa12.89□□□□□ -0.35
ERCC1-207ENST00000588738 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
ERCC1-207ENST00000588738 NUDT10Q8NFP7 164 aa12.89□□□□□ -0.35
ERCC1-207ENST00000588738 NUDT11Q96G61 164 aa12.89□□□□□ -0.35
ERCC1-207ENST00000588738 DNAH2Q9P225 4427 aa12.89□□□□□ -0.35
ERCC1-207ENST00000588738 MUC21A0A0G2JKD1 596 aa12.88□□□□□ -0.35
ERCC1-207ENST00000588738 MUC21A0A140T8X8 626 aa12.88□□□□□ -0.35
ERCC1-207ENST00000588738 K7EN84 100 aa12.88□□□□□ -0.35
ERCC1-207ENST00000588738 TIRAPP58753 221 aa12.88□□□□□ -0.35
ERCC1-207ENST00000588738 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
ERCC1-207ENST00000588738 IGLC6P0CF74 106 aa12.87□□□□□ -0.35
ERCC1-207ENST00000588738 SSTP61278 116 aa12.87□□□□□ -0.35
ERCC1-207ENST00000588738 C6orf223Q8N319 242 aa12.87□□□□□ -0.35
ERCC1-207ENST00000588738 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
ERCC1-207ENST00000588738 ATP6V0E2Q8NHE4 81 aa12.87□□□□□ -0.35
ERCC1-207ENST00000588738 PRSS29PA6NIE9 313 aa12.86□□□□□ -0.35
ERCC1-207ENST00000588738 F2Z2F3 143 aa12.86□□□□□ -0.35
ERCC1-207ENST00000588738 SRP19P09132 144 aaKnown RBP12.86□□□□□ -0.35
ERCC1-207ENST00000588738 SMIM7Q9BQ49 75 aa12.86□□□□□ -0.35
ERCC1-207ENST00000588738 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
ERCC1-207ENST00000588738 LY96Q9Y6Y9 160 aa12.86□□□□□ -0.35
ERCC1-207ENST00000588738 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 CACNG7P62955 275 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 GAGE1Q13065 139 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 GAGE4Q13068 117 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 GAGE5Q13069 117 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 KRTAP1-5Q9BYS1 174 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
ERCC1-207ENST00000588738 RPP21Q9H633 154 aaKnown RBP12.85□□□□□ -0.35
ERCC1-207ENST00000588738 TRAV9-2A0A087WT02 112 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 ZNF727A8MUV8 499 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 RAB4BP61018 213 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 WFDC10BQ8IUB3 73 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 AP1S3Q96PC3 154 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 Q9UF83 564 aa12.84□□□□□ -0.35
ERCC1-207ENST00000588738 TRAV8-6A0A0B4J262 113 aa12.83□□□□□ -0.36
ERCC1-207ENST00000588738 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
ERCC1-207ENST00000588738 ZNF56Q15929 161 aa12.83□□□□□ -0.36
ERCC1-207ENST00000588738 LYZL1Q6UWQ5 148 aa12.83□□□□□ -0.36
ERCC1-207ENST00000588738 TRBV10-1A0A0K0K1A3 114 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 K7EP13 123 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 EVI2AP22794 236 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 PEA15Q15121 130 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 OR10J3Q5JRS4 329 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
ERCC1-207ENST00000588738 F5H697 171 aa12.81□□□□□ -0.36
ERCC1-207ENST00000588738 GATCO43716 136 aaKnown RBP12.81□□□□□ -0.36
ERCC1-207ENST00000588738 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
ERCC1-207ENST00000588738 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
ERCC1-207ENST00000588738 LELP1Q5T871 98 aa12.81□□□□□ -0.36
ERCC1-207ENST00000588738 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
ERCC1-207ENST00000588738 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
ERCC1-207ENST00000588738 RPL36AP83881 106 aaKnown RBP12.8□□□□□ -0.36
ERCC1-207ENST00000588738 FAM74A3Q4VXF1 159 aa12.8□□□□□ -0.36
ERCC1-207ENST00000588738 WDR73Q6P4I2 378 aa12.8□□□□□ -0.36
ERCC1-207ENST00000588738 LINC01551Q86U37 167 aa12.8□□□□□ -0.36
ERCC1-207ENST00000588738 RPL36ALQ969Q0 106 aaKnown RBP12.8□□□□□ -0.36
ERCC1-207ENST00000588738 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
ERCC1-207ENST00000588738 KIF25-AS1Q9Y6Z4 181 aa12.8□□□□□ -0.36
ERCC1-207ENST00000588738 DNAH17Q9UFH2 4485 aa12.79□□□□□ -0.36
ERCC1-207ENST00000588738 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
ERCC1-207ENST00000588738 A0A087WWC5 75 aa12.79□□□□□ -0.36
ERCC1-207ENST00000588738 A8MWL6 223 aa12.79□□□□□ -0.36
ERCC1-207ENST00000588738 NTF3P20783 257 aa12.79□□□□□ -0.36
ERCC1-207ENST00000588738 CTRLP40313 264 aa12.79□□□□□ -0.36
ERCC1-207ENST00000588738 TRGC1P0CF51 173 aa12.78□□□□□ -0.36
ERCC1-207ENST00000588738 LINC00315P59091 139 aa12.78□□□□□ -0.36
ERCC1-207ENST00000588738 RAB14P61106 215 aa12.78□□□□□ -0.36
ERCC1-207ENST00000588738 TMEM241Q24JQ0 296 aa12.78□□□□□ -0.36
ERCC1-207ENST00000588738 FAT2Q9NYQ8 4349 aa12.78□□□□□ -0.36
ERCC1-207ENST00000588738 A0A1B0GVY2 172 aa12.77□□□□□ -0.37
ERCC1-207ENST00000588738 C9JQL5 133 aa12.77□□□□□ -0.37
ERCC1-207ENST00000588738 SRSF3P84103 164 aaKnown RBP12.77□□□□□ -0.37
ERCC1-207ENST00000588738 C10orf126Q8N4M7 172 aa12.77□□□□□ -0.37
ERCC1-207ENST00000588738 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
ERCC1-207ENST00000588738 CNFNQ9BYD5 112 aa12.77□□□□□ -0.37
ERCC1-207ENST00000588738 MGPP08493 103 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 TNP2Q05952 138 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 TWIST1Q15672 202 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 CT83Q5H943 113 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 LINC01556Q5JQF7 62 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
ERCC1-207ENST00000588738 UBE2D3P61077 147 aa12.75□□□□□ -0.37
ERCC1-207ENST00000588738 UBE2D2P62837 147 aa12.75□□□□□ -0.37
ERCC1-207ENST00000588738 NFE4Q86UQ8 179 aa12.75□□□□□ -0.37
ERCC1-207ENST00000588738 C15orf54Q8N8G6 183 aa12.75□□□□□ -0.37
ERCC1-207ENST00000588738 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-207ENST00000588738 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
ERCC1-207ENST00000588738 DPH3P1Q9H4G8 78 aa12.75□□□□□ -0.37
ERCC1-207ENST00000588738 H7C1H1 209 aa12.74□□□□□ -0.37
ERCC1-207ENST00000588738 NAT8Q9UHE5 227 aa12.74□□□□□ -0.37
ERCC1-207ENST00000588738 HECTD4Q9Y4D8 3996 aa12.73□□□□□ -0.37
ERCC1-207ENST00000588738 FOXA3P55318 350 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms