RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 SFRP2Q96HF1 295 aa9.01□□□□□ -0.97
SREBF1-223ENST00000584760 Q9UF83 564 aa9.01□□□□□ -0.97
SREBF1-223ENST00000584760 TNFRSF18Q9Y5U5 241 aa9.01□□□□□ -0.97
SREBF1-223ENST00000584760 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 A0A087WWL8 130 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 PDE6DO43924 150 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 IFNA1P01562 189 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 IGLV2-8P01709 118 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 CRYGDP07320 174 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 EVI2AP22794 236 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 FAM74A4Q5TZK3 123 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 GTSF1LQ9H1H1 148 aa9□□□□□ -0.97
SREBF1-223ENST00000584760 HERC1Q15751 4861 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 TRBV20OR9-2A0A075B6H5 130 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 GAGE12JA6NER3 117 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 SNAI2O43623 268 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 GAGE1Q13065 139 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 GAGE4Q13068 117 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 GAGE5Q13069 117 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 GAGE13Q4V321 117 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 LINC01556Q5JQF7 62 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 LELP1Q5T871 98 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 ATP6V0E2Q8NHE4 81 aa8.99□□□□□ -0.97
SREBF1-223ENST00000584760 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
SREBF1-223ENST00000584760 TRAV8-6A0A0B4J262 113 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 A0A1B0GVG6 124 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 OR5AL1P0C617 328 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 GNG4P50150 75 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 OR10J3Q5JRS4 329 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 NFE4Q86UQ8 179 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 C10orf126Q8N4M7 172 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 SMIM12Q96EX1 92 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 MSRB1Q9NZV6 116 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 VAX2Q9UIW0 290 aa8.98□□□□□ -0.97
SREBF1-223ENST00000584760 RAB19A4D1S5 217 aa8.97□□□□□ -0.97
SREBF1-223ENST00000584760 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
SREBF1-223ENST00000584760 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
SREBF1-223ENST00000584760 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
SREBF1-223ENST00000584760 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
SREBF1-223ENST00000584760 EPM2AB3EWF7 344 aa8.96□□□□□ -0.98
SREBF1-223ENST00000584760 TAGLN2P37802 199 aaKnown RBP8.96□□□□□ -0.98
SREBF1-223ENST00000584760 MED9Q9NWA0 146 aa8.96□□□□□ -0.98
SREBF1-223ENST00000584760 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
SREBF1-223ENST00000584760 IGLC6P0CF74 106 aa8.95□□□□□ -0.98
SREBF1-223ENST00000584760 INAFM2P0DMQ5 153 aa8.95□□□□□ -0.98
SREBF1-223ENST00000584760 NKX2-5P52952 324 aaPredicted RBP8.95□□□□□ -0.98
SREBF1-223ENST00000584760 Q8N3U1 123 aa8.95□□□□□ -0.98
SREBF1-223ENST00000584760 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
SREBF1-223ENST00000584760 MUC21A0A0G2JKD1 596 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 MUC21A0A140T8X8 626 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 GZMBP10144 247 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 ERVFC1-1P60608 527 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 RAB4BP61018 213 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 SPANXN1Q5VSR9 72 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 OR2D3Q8NGH3 330 aa8.94□□□□□ -0.98
SREBF1-223ENST00000584760 A0A087WTM6 91 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 A0A087WWC5 75 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 IGHV3-30P01768 117 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 IGHV3-33P01772 117 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 IGHV3-30-3P0DP02 117 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 IGHV3-30-5P0DP03 117 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 RPS20P60866 119 aaKnown RBP8.93□□□□□ -0.98
SREBF1-223ENST00000584760 BLOC1S1P78537 153 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 ZNF56Q15929 161 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 OR10G8Q8NGN5 311 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 DAZAP1Q96EP5 407 aaKnown RBP8.93□□□□□ -0.98
SREBF1-223ENST00000584760 AP1S3Q96PC3 154 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 KIF25-AS1Q9Y6Z4 181 aa8.93□□□□□ -0.98
SREBF1-223ENST00000584760 TRBV7-3A0A075B6L6 115 aa8.92□□□□□ -0.98
SREBF1-223ENST00000584760 P01737 135 aa8.92□□□□□ -0.98
SREBF1-223ENST00000584760 UBE2D3P61077 147 aa8.92□□□□□ -0.98
SREBF1-223ENST00000584760 UBE2D2P62837 147 aa8.92□□□□□ -0.98
SREBF1-223ENST00000584760 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
SREBF1-223ENST00000584760 LAGE3Q14657 143 aa8.92□□□□□ -0.98
SREBF1-223ENST00000584760 FER1L6-AS1Q8NA97 138 aa8.92□□□□□ -0.98
SREBF1-223ENST00000584760 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
SREBF1-223ENST00000584760 RBFOX3A6NFN3 312 aa8.91□□□□□ -0.98
SREBF1-223ENST00000584760 TMEM250H0YL14 139 aa8.91□□□□□ -0.98
SREBF1-223ENST00000584760 K7EN84 100 aa8.91□□□□□ -0.98
SREBF1-223ENST00000584760 SSTP61278 116 aa8.91□□□□□ -0.98
SREBF1-223ENST00000584760 NEXN-AS1Q8NBZ9 246 aa8.91□□□□□ -0.98
SREBF1-223ENST00000584760 BIN3Q9NQY0 253 aa8.91□□□□□ -0.98
SREBF1-223ENST00000584760 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
SREBF1-223ENST00000584760 EREGO14944 169 aa8.9□□□□□ -0.98
SREBF1-223ENST00000584760 CTRLP40313 264 aa8.9□□□□□ -0.98
SREBF1-223ENST00000584760 TPPP3Q9BW30 176 aa8.9□□□□□ -0.98
SREBF1-223ENST00000584760 Q9HAA7 133 aa8.9□□□□□ -0.98
SREBF1-223ENST00000584760 XKRY2A2RUG3 117 aa8.89□□□□□ -0.99
SREBF1-223ENST00000584760 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.99
SREBF1-223ENST00000584760 CACNG7P62955 275 aa8.89□□□□□ -0.99
SREBF1-223ENST00000584760 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
SREBF1-223ENST00000584760 NIT1Q86X76 327 aa8.89□□□□□ -0.99
SREBF1-223ENST00000584760 NUDT10Q8NFP7 164 aa8.89□□□□□ -0.99
SREBF1-223ENST00000584760 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
SREBF1-223ENST00000584760 NUDT11Q96G61 164 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms